Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1278 150 3e-34 seq1051 84.2 4e-14 seq693 78.8 2e-12 >seq1278 Length=723 Score = 150 bits (166), Expect = 3e-34 Identities = 97/106 (92%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | Sbjct 618 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTGT 677 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGA 137 || |||||||||||||||||||| |||||| ||||||| |||| Sbjct 678 AAGCGGGTGAACAATCCAACGCTTGGCGAATTTTGCTTCGCAATGA 723 >seq1051 Length=1463 Score = 84.2 bits (92), Expect = 4e-14 Identities = 128/181 (71%), Gaps = 6/181 (3%) Strand=Plus/Minus Query 47 ACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT 106 || || |||||||| |||| ||| |||||||||| ||| || ||| |||| ||||| Sbjct 606 ACCAAACTGTCTCACGACGTTCTGAACCCAGCTCGCGTACCGCTTTAATGGGCGAACAGC 547 Query 107 CCAACGCTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCA 163 ||||| ||| | ||| | | || | | ||| || ||||||||||||| | || Sbjct 546 CCAACCCTTGGAAGCGACTACACCTCCAGGATGC---GATGAGCCGACATCGAGGTGCCA 490 Query 164 AAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTT 223 || | |||| ||||||| |||| | | |||| |||||||| | ||||||||| Sbjct 489 AACCTCCCCGTCTATATGAACTATTGGGAGAGATTAGCCTGTTATCCCCGGGGTAACTTT 430 Query 224 T 224 | Sbjct 429 T 429 >seq693 Length=350174 Score = 78.8 bits (86), Expect = 2e-12 Identities = 123/175 (70%), Gaps = 6/175 (3%) Strand=Plus/Plus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| ||| |||||||||||||| || ||| | || ||||| | ||| Sbjct 349698 CTGTCTCACGACGTTCTGAACCCAGCTCACGTACCACTTTAATCGGCGAACAGCCGAACC 349757 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||| |||| | | | ||| || ||||||||||||| | |||| | Sbjct 349758 CTTGGGACC---TTCTCCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAACGAC 349814 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| |||| || ||||| | || |||| |||||||| | ||| ||||| Sbjct 349815 GCCGTCGATATGGACTCTTGGGCGTCATCAGCCTGTTATCCCCGGCGTACCTTTT 349869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854387192544