Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq801 100 4e-19 seq1095 84.2 3e-14 seq1291 78.8 1e-12 >seq801 Length=203187 Score = 100 bits (110), Expect = 4e-19 Identities = 72/83 (87%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 67 GGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCGCCCAGG 126 || ||||||||||| |||||||||||||| |||||||||||||| ||||| ||||||||| Sbjct 32574 GGGGCTTCTTCCAGCACCTTCTGGTGACGGCGTTGCAGCGAGCAGTCGCGTTCGCCCAGG 32515 Query 127 TGGATGGCGTGGCCCTGGCCGTC 149 |||| | | | ||| |||| ||| Sbjct 32514 TGGACGACATTGCCGTGGCTGTC 32492 >seq1095 Length=1089284 Score = 84.2 bits (92), Expect = 3e-14 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 59 CCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGT 118 |||| | ||| |||||||| |||||||| || || || |||| |||||||||||| | Sbjct 444623 CCGGCGACGGGCCTTCTTCCCAGACCTTCTGATGGCGCCGCTGCAACGAGCAATCGCGCT 444682 Query 119 CGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGTG 178 |||| || ||||| || ||| | |||||| ||| | || | ||| | || || | Sbjct 444683 CGCCGAGATGGATAGCACCGCCGCGTCCGTCGCCCAGAATCTGGATTTCGATATGTCGCG 444742 Query 179 GGTTGGTCAGGTACTTTTCCAGGTAGACCATCGGGTTGCCGAAC 222 | || || |||||||| || |||||| || | ||||||| Sbjct 444743 GCTTCTGCAAATACTTTTCGAGATAGACCGACGCATCGCCGAAC 444786 >seq1291 Length=542012 Score = 78.8 bits (86), Expect = 1e-12 Identities = 100/138 (72%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 54 CAGGCCCGGTGCCGGCGCTTCTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATC 113 || |||||| || ||||| ||||| | ||||||||||| || ||||||||||| || || Sbjct 12637 CATGCCCGGCGCAGGCGCCTCTTCGATCACCTTCTGGTGGCGGCGTTGCAGCGAACAGTC 12696 Query 114 GCGGTCGCCCAGGTGGATGGCGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTG 173 ||| ||| |||||||| | | | ||| || ||| | || ||||| || | ||| Sbjct 12697 GCGCTCGTACAGGTGGACGACATTGCCGTGCTTGTCCCCGAACACCTGCACCTCGATGTG 12756 Query 174 ACGTGGGTTGGTCAGGTA 191 || ||| ||| | ||| Sbjct 12757 GCGCGGGCGGGTGATGTA 12774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735989312130