Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= AAMG01001377.1 Length=151 Score E Sequences producing significant alignments: (Bits) Value seq1095 82.4 6e-14 seq752 82.4 6e-14 >seq1095 Length=1089284 Score = 82.4 bits (90), Expect = 6e-14 Identities = 93/121 (77%), Gaps = 4/121 (3%) Strand=Plus/Plus Query 33 CGCGCCCAGGTCGGCACTGACAACGT-AT-TGCTTGGCCTGTCCGGCGGCGTTGACTCCT 90 ||||| |||||||||| | ||| || || ||| ||||| ||||||||||| || || | Sbjct 326290 CGCGCGCAGGTCGGCAAAGGCAAGGTGATCTGC--GGCCTCTCCGGCGGCGTCGATTCAT 326347 Query 91 CGGTTGTAGCGGCACTGCTGCACAAGGCCATCGGCGACCAACTGACCTGCGTGTTTGTCG 150 | || | ||| ||| | ||| | ||||| |||||||| || ||||||||||| |||| Sbjct 326348 CCGTCGCGGCGATCCTGATTCACGAAGCCATTGGCGACCAGCTCACCTGCGTGTTCGTCG 326407 Query 151 A 151 | Sbjct 326408 A 326408 >seq752 Length=262051 Score = 82.4 bits (90), Expect = 6e-14 Identities = 100/133 (75%), Gaps = 4/133 (3%) Strand=Plus/Minus Query 21 ATCGCCCAAGTGCGCGCCCAGGTCGGCACTGACAACGT-AT-TGCTTGGCCTGTCCGGCG 78 |||||||| | |||| ||||||||| | ||| || || ||| || ||||| |||| Sbjct 213350 ATCGCCCAGATCCGCGAACAGGTCGGCGACGCCAAGGTGATCTGC--GGTCTGTCGGGCG 213293 Query 79 GCGTTGACTCCTCGGTTGTAGCGGCACTGCTGCACAAGGCCATCGGCGACCAACTGACCT 138 |||| || || || || | || | ||| | || |||||||||||||||| ||||||| Sbjct 213292 GCGTGGATTCGTCTGTCGCCGCCGTGCTGATCCATGAGGCCATCGGCGACCAGCTGACCT 213233 Query 139 GCGTGTTTGTCGA 151 |||| || ||||| Sbjct 213232 GCGTCTTCGTCGA 213220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 383994423720