Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= AAMG01001383.1 Length=561 Score E Sequences producing significant alignments: (Bits) Value seq733 120 1e-24 >seq733 Length=265776 Score = 120 bits (132), Expect = 1e-24 Identities = 239/341 (70%), Gaps = 16/341 (5%) Strand=Plus/Minus Query 91 GACGAAGTTCTGCTCCGTGAGGACGGCCATCTGACTTAGATAATTTAAGGACGCCTCACC 150 ||||||||||||| |||| ||| || ||||||| | | | || | ||| || Sbjct 142376 GACGAAGTTCTGCACCGTCAGGCCGACCATCTGGGTGAAGGTCGACATGGTGGTCTCGCC 142317 Query 151 GCTGTTGTTCTGCCAGTTGGTATTGGTCATGAAACTGACGGCGGTATTAAACGCCTAGGT 210 || | | ||||||||||||| ||||| | || ||||||||||| || || ||| |||| Sbjct 142316 GCCATAGCTCTGCCAGTTGGTGTTGGTGACAAAGCTGACGGCGGTGTTGAAGGCC-AGGT 142258 Query 211 CCATTCCTG--GCCCGGCAGGTTTTGCGGGTTCAGCGGGAGGGAGCCTTGAAATAACAGA 268 | | || ||||| | |||||||||| ||| ||| ||| || | ||| Sbjct 142257 GCGGAC-TGACGCCCGCGAACCCCTGCGGGTTCATCGGCAGGACGCCCTGCAGACGCAGC 142199 Query 269 ATAGAGAACAGCAGCAGGAAGCCGGCGAGGTTGAATGCGAGCAAG--GCCAGCATGTACT 326 || | | |||||||||||||||| || |||||||| || |||| | ||| || ||| Sbjct 142198 ATGGCGTACAGCAGCAGGAAGCCCGCCAGGTTGAAGGCCAGCAGGGCGCCGGC--GTAAC 142141 Query 327 TCTGCC-AGCTTTGTTCCTGCTGTGCGTCCACACCCGACAG-GCGAT--AACAGGCGCTT 382 | ||| | | | | | | ||| | ||| || |||| | | ||||| ||||||| | Sbjct 142140 CCAGCCAACCCTGGCTGCGGCT-CGGGTCGAC-CCCGGCGGCGCGATAAAACAGGCCC-- 142085 Query 383 TCCACCGGCCCCAGCACCGGGCTGAGCCAGGTGCGCTGGCC 423 || |||||| |||||||||| ||||||||||||| ||| Sbjct 142084 TCGACCGGCTTCAGCACCGGGTCCAGCCAGGTGCGCTCGCC 142044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1692774624928