Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq966 242 7e-62 seq812 228 2e-57 seq249 208 2e-51 seq917 203 6e-50 seq1212 187 5e-45 seq1414 89.7 1e-15 >seq966 Length=90452 Score = 242 bits (268), Expect = 7e-62 Identities = 239/306 (78%), Gaps = 17/306 (6%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||||| ||||| |||| ||||||| |||| || ||||||||||||||||||||| Sbjct 88879 GGCATGGCTGCGTCAGGCTTTCGCCCATTGCGCAAGATTCCCCACTGCTGCCTCCCGTAG 88820 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||| ||||||||||||||||||||||||||| | ||| |||||||| || ||||| ||| Sbjct 88819 GAGTTTGGGCCGTGTCTCAGTCCCAATGTGGCTGATCATCCTCTCAGACCAGCTACTGAT 88760 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| ||||||| || ||| ||||||||||| |||||| | |||| ||| ||| Sbjct 88759 CGTCGCCTTGGTGAGCCTTTACCTCACCAACTAGCTAATCAGACGCGGGCCGCTCTAAAG 88700 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240 ||||||||||||| | ||| | || ||||| |||||||||| Sbjct 88699 GCGATAAATCTTT--CCCCCGAAGG--GC---------ACATT---CGGTATTAGCACAA 88656 Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300 |||||| |||||||| | ||||||| ||| | |||||||||||||||||||||| Sbjct 88655 GTTTCCCTGAGTTATTCCGAACCTAAAGGCACGTT-CCCACGTGTTACTCACCCGTCCGC 88597 Query 301 CACTAA 306 |||||| Sbjct 88596 CACTAA 88591 >seq812 Length=1388629 Score = 228 bits (252), Expect = 2e-57 Identities = 225/293 (77%), Gaps = 17/293 (6%) Strand=Plus/Plus Query 12 ATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCC 71 |||||| |||| |||||||| |||||| ||||||||||||||||||||||||| |||||| Sbjct 2 ATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTTTGGGCC 61 Query 72 GTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGG 131 ||||||||||||||||||||| | ||| |||||||| || ||||| |||||||| ||||| Sbjct 62 GTGTCTCAGTCCCAATGTGGCTGATCATCCTCTCAGACCAGCTACTGATCGTCGCCTTGG 121 Query 132 TGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATAAATCT 191 || || ||| ||||||||| | |||||| | |||| ||| ||||||| ||||||||||| Sbjct 122 TGAGCCGTTACCTCACCAACAAGCTAATCAGACGCGGGCCGATCTTTCGGCGATAAATCT 181 Query 192 TTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAACG 251 || | | | | |||| |||||||||| |||||| | Sbjct 182 TT----------------CCCCGTAAGGGCTTATTCGGTATTAGCACAAGTTTCCCTGTG 225 Query 252 TTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304 || |||| | ||||| | ||| | |||| |||||||||||||| |||||| Sbjct 226 TTGTTCCGAACCAAAAGGTACGTT-CCCACGCGTTACTCACCCGTCTGCCACT 277 >seq249 Length=9465 Score = 208 bits (230), Expect = 2e-51 Identities = 162/193 (84%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| || | |||||||| |||||| ||||||||||||||||||||| Sbjct 8527 GGCATGGCTGGATCAGGCTTGCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 8586 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||| | ||| |||||||| || |||| ||| Sbjct 8587 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGACCAGCTATGGAT 8646 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| ||||||| || ||| ||||||||||| |||||| |||| ||| ||| || Sbjct 8647 CGTCGCCTTGGTGAGCCTTTACCTCACCAACTAGCTAATCCAACGCGGGCCGATCCTTTG 8706 Query 181 GCGATAAATCTTT 193 |||||||||||| Sbjct 8707 CCGATAAATCTTT 8719 >seq917 Length=2224 Score = 203 bits (224), Expect = 6e-50 Identities = 226/299 (76%), Gaps = 7/299 (2%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | ||| ||||||| |||| ||||||||| || || ||| |||||||||| |||||| Sbjct 1927 GGCATTGCTCCATCAGGCTTTCGCCCATTGTGAAAAATTCCCTACTGCTGCCTTCCGTAG 1986 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||| ||||||||||||||||||||||||||||||||| |||||||| ||||||| || Sbjct 1987 AAGTTTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCATCCTCTCAGATCGGCTACGCAT 2046 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||| |||||| || |||| || |||||||| |||| ||||| |||||| | | Sbjct 2047 CGTTACCTTGGTAAGCCATTACCTTACCAACTAGTTAATGCGCCGCATCCCCATCAATTA 2106 Query 181 GCGA--TAAAT----CTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTA 234 |||| |||| |||| | | | ||| | | ||| |||||||||||| Sbjct 2107 GCGAAGCAAATGCTCCTTTCATTATTTATCATTGCAAATAAATAACA-TATGCGGTATTA 2165 Query 235 GCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACC 293 || |||||||||| |||||||| | || || || ||||| |||||||||||||| Sbjct 2166 GCTGTCGTTTCCAACAGTTATTCCCCACTAAATGGTAGGTTAGATACGTGTTACTCACC 2224 >seq1212 Length=36954 Score = 187 bits (206), Expect = 5e-45 Identities = 250/345 (72%), Gaps = 21/345 (6%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| |||| |||||||| |||||| ||||||||||||||||||||| Sbjct 1339 GGCATGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 1280 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||| ||||||| ||| |||||| | ||| |||||||| | |||| ||| Sbjct 1279 GAGTCTGGACCGTATCTCAGTTCCAGTGTGGCTGATCATCCTCTCAGATCAGCTATAGAT 1220 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | | | |||||| |||||||| ||||||||| |||||| || ||||| | Sbjct 1219 CATTGCCTTGGTAGGCTATTACTCCACCAACTAGCTAATCTAATATAGGCTCATCTAATA 1160 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240 || |||||| ||| || | | | | ||| ||||||||| | Sbjct 1159 GCAATAAATTTTT---------------CCCCCGTAGGGC-GTATACGGTATTAGTTGCC 1116 Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300 |||||||| ||||||| || ||| || || || | ||||||||||||| || Sbjct 1115 GTTTCCAACAATTATTCCGTACTACTAGGTAGATTCCT-ATACATTACTCACCCGTCTGC 1057 Query 301 CACTAAGCTATA-TATCCAGCAAGCTTTCAACATAGCTCCGTTCG 344 ||||||| |||| || ||||||| | ||||||| ||||||||| Sbjct 1056 CACTAAGTTATACCAT--AGCAAGC-TACAACATAACTCCGTTCG 1015 >seq1414 Length=16280 Score = 89.7 bits (98), Expect = 1e-15 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 223 TATGCGGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACG 282 |||||||||||||| |||||||||| |||||||| | || || || ||||| ||| Sbjct 48 TATGCGGTATTAGCTGTCGTTTCCAACAGTTATTCCCCACTAAATGGTAGGTTAGATACG 107 Query 283 TGTTACTCACCCGTCCGCCACTAA 306 |||||||||||||| ||||||||| Sbjct 108 TGTTACTCACCCGTTCGCCACTAA 131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998385033984