Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= AAMG01001435.1 Length=587 Score E Sequences producing significant alignments: (Bits) Value seq713 152 2e-34 seq998 143 9e-32 seq901 125 3e-26 seq1388 114 5e-23 >seq713 Length=1192841 Score = 152 bits (168), Expect = 2e-34 Identities = 185/250 (74%), Gaps = 4/250 (2%) Strand=Plus/Minus Query 4 ATGTACGGCGGTGGTTTTGCCACGGTTCCGGCTTACCTGGCCGACCTGTTCGGTACGCAG 63 ||||| ||||| || || | || || ||||| || || ||| ||||||| || Sbjct 716574 ATGTATGGCGGCGGCTTCTCGACCGTGCCGGCATATCTCAAGGACATGTTCGGCGTGCGC 716515 Query 64 ATGGTCGGTGCGATCCACGGTCGCCTGCTGACCGCCTGGGCAGCGGCGGGCGTCTTGGGC 123 ||||| ||||||||||| | ||| || ||||||||| ||||||||||| |||| ||| Sbjct 716514 TACGTCGGCGCGATCCACGGCCTCCTACTCACCGCCTGGTCAGCGGCGGGCATCTTCGGC 716455 Query 124 CCGGTGTTGGTGAACTATCTGCGTGAGTATCAGTTGAGCATCGGCGT--TGAACGCGCTG 181 ||||| | || |||||||| || ||||| | | | |||||| ||| |||| Sbjct 716454 CCGGTCATCGTCAACTATCTTCGGGAGTACAATATCACTCACGGCGTCCCGAAGGCGC-- 716397 Query 182 CGGCCTATGACATCACCTTGTACATCCTCGCTGGCCTGCTGGTGCTGGGGTTCATCTGCA 241 |||||| ||| |||| |||| ||| | || |||||||||||| | || |||||||||| Sbjct 716396 AGGCCTACAACAACACCATGTATATCATGGCAGGCCTGCTGGTGATCGGCTTCATCTGCA 716337 Query 242 ACCTGCTGGT 251 | |||||||| Sbjct 716336 ATCTGCTGGT 716327 >seq998 Length=1052685 Score = 143 bits (158), Expect = 9e-32 Identities = 208/287 (72%), Gaps = 14/287 (5%) Strand=Plus/Plus Query 1 TCGATGTACGGCGGTGGTTTTGCCACGGTTCCGGCTTACCTGGCCGACCTGTTCGGTACG 60 |||||||| ||||| || || | || |||||||| || ||| ||||||||||| ||| Sbjct 352724 TCGATGTATGGCGGCGGCTTCTCAACCGTTCCGGCCTATCTGCGTGACCTGTTCGGCACG 352783 Query 61 CAGATGGTCGGTGCGATCCACGGTCGCCTGCTGACCGCCTGGGCAGCGGCGGGCGTCTTG 120 | | ||||| || |||||||| ||||| ||||||||| | ||||| || ||| | Sbjct 352784 CGGTACGTCGGCGCCATCCACGGCATTCTGCTTACCGCCTGGTCGGCGGCAGGTGTCGCG 352843 Query 121 GGCCCGGTGTTGGTGAACTATCTGCGTGAGTATCAGTTGA-GCATCGGCGTT--GAACGC 177 || |||||| | || |||||||| |||||||| | | | ||| ||| ||| ||| || Sbjct 352844 GGTCCGGTGATCGTCAACTATCTCCGTGAGTACAACATCACGCA-CGGTGTTCCGAAGGC 352902 Query 178 GCTGCGGCCTATGACATCACCTTGTACATCCTCGCTGGCCTGCTGGTGCTGGGGTTCATC 237 || ||||| ||| |||| |||||||| | || || |||||||| | || ||||| Sbjct 352903 GC--AAGCCTACAACAACACCATGTACATCATGGCCGGGTTGCTGGTGATCGGCTTCATT 352960 Query 238 TGCAACCTGCTGGTGCGTC----CGGTGGCCGACAAGTACTTCATGA 280 |||| ||| |||||| | |||| | | |||||| ||||| Sbjct 352961 GCCAAC--GCT--TGCGTCAAGGCCGTGGACAAGAAGTACCACATGA 353003 >seq901 Length=17745 Score = 125 bits (138), Expect = 3e-26 Identities = 183/254 (72%), Gaps = 6/254 (2%) Strand=Plus/Minus Query 1 TCGATGTACGGCGGTGGTTTTGCCACGGTTCCGGCTTACCTGGCCGACCTGTTCGGTACG 60 |||||||||||||| || || | || || ||||| || || ||| ||||||| Sbjct 13314 TCGATGTACGGCGGCGGCTTCTCGACAGTGCCGGCCTATCTCAAGGACATGTTCGGCGTC 13255 Query 61 CAGATGGTCGGTGCGATCCACGGTCGCCTGCTGACCGCCTGGGCAGCGGCGGGCGTCTTG 120 | | ||||| || |||||||| | ||||||| || ||| | ||| ||| |||| Sbjct 13254 CGGTATGTCGGCGCTATCCACGGCCTGTTGCTGACGGCTTGGTCGATGGCCGGCATCTTC 13195 Query 121 GGCCCGGTGTTGGTGAACTATCTGCGTGAGTATCAGTTGA-GCATCGGCGTT--GAACGC 177 || |||||| | || |||||||| || ||||| | | | ||| || ||| ||| || Sbjct 13194 GGTCCGGTGATCGTCAACTATCTCCGCGAGTACAACATCACTCAT-GGTGTTCCGAAGGC 13136 Query 178 GCTGCGGCCTATGACATCACCTTGTACATCCTCGCTGGCCTGCTGGTGCTGGGGTTCATC 237 || |||||| ||| |||| |||||||| | || || ||||||||| | || |||||| Sbjct 13135 GC--AGGCCTACAACAACACCATGTACATCATGGCAGGTCTGCTGGTGATCGGCTTCATC 13078 Query 238 TGCAACCTGCTGGT 251 |||||||| |||| Sbjct 13077 TGCAACCTCTTGGT 13064 >seq1388 Length=494395 Score = 114 bits (126), Expect = 5e-23 Identities = 174/243 (72%), Gaps = 6/243 (2%) Strand=Plus/Plus Query 4 ATGTACGGCGGTGGTTTTGCCACGGTTCCGGCTTACCTGGCCGACCTGTTCGGTACGCAG 63 ||||| || || || ||| | |||||||| || || ||| ||||||||||||||||| | Sbjct 202224 ATGTATGGTGGCGGGTTTTCGACGGTTCCTGCCTATCTGCGCGACCTGTTCGGTACGC-G 202282 Query 64 AT-GGTCGGTGCGATCCACGGTCGCCTGCTGACCGCCTGGGCAGCGGCGGGCGTCTTGGG 122 || ||||| || || ||||| |||||||||||| ||| | ||||| || ||| || Sbjct 202283 ATACGTCGGGGCTATTCACGGCATCCTGCTGACCGCGTGGTCGGCGGCCGGTGTCGCAGG 202342 Query 123 CCCGGTGTTGGTGAACTATCTGCGTGAGTATCAGTTGAGCATCGGCGT--TGAACGCGCT 180 ||| ||| || | ||||| | || ||||| | | | | ||| || ||| ||| Sbjct 202343 CCCCGTGCTGATCAACTACATCCGCGAGTACAACGTCACCCACGGTGTCCCGAA--GGCT 202400 Query 181 GCGGCCTATGACATCACCTTGTACATCCTCGCTGGCCTGCTGGTGCTGGGGTTCATCTGC 240 ||| || ||| |||| |||||||| | || || || | ||| | || || |||||| Sbjct 202401 CAGGCTTACAACACCACCATGTACATCATGGCGGGTCTCTTCGTGATCGGCTTTATCTGC 202460 Query 241 AAC 243 ||| Sbjct 202461 AAC 202463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1775973377760