Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= AAMG01001449.1 Length=395 Score E Sequences producing significant alignments: (Bits) Value seq1291 194 4e-47 >seq1291 Length=542012 Score = 194 bits (214), Expect = 4e-47 Identities = 291/401 (73%), Gaps = 12/401 (3%) Strand=Plus/Plus Query 1 CGACGGCACCGGCACGGTGTGGAAGGGCGGCCTGTTCCCGTTCCTGTTCATCACCATTGC 60 ||||||||| ||| |||| | ||||| ||||||||| ||||||||||||||||| || Sbjct 402318 CGACGGCACAGGCCCGGTCTTCGCGGGCGCCCTGTTCCCCTTCCTGTTCATCACCATCGC 402377 Query 61 CTGTGGCGCGGTCTCGGGTTTCCATGCGCTGATCTCCTCGGGCACCACGCCCAAGTTGCT 120 ||||||||| || || || ||||| || |||||||| || ||||||||||||||| |||| Sbjct 402378 CTGTGGCGCCGTGTCCGGCTTCCACGCCCTGATCTCGTCCGGCACCACGCCCAAGCTGCT 402437 Query 121 CGCCAGTGAGAGCCA-TGCCCGTTACATCGGTTACGGCGGCATGCTGATGGAGTCGTTCG 179 | | || | ||| |||||| ||||| || |||| ||||||| || |||| Sbjct 402438 GGAGAACGAAAACCAGATCCCGTT-GATCGGCTATGGCGCCATGCTGTGCGAAAGCTTCG 402496 Query 180 TGGCCATCATGGCGATGGTTGCCGCCTCGGTGATTGAGCCCGGCGTGTACTTCGCCATGA 239 | || ||||||| || | |||||| |||| | || || | || || |||||||||| Sbjct 402497 TCGCGGTCATGGCCCTGATCGCCGCCACGGTTCTGGATCCGGCGGTCTATTTCGCCATGA 402556 Query 240 ACAGCCCGGCTGCCATTGTCGGCACCGACGTGGTCACCGTGGCGC--AAACCGTCAG--C 295 |||||||||| | || ||||||| |||| | || || | ||| |||| || | Sbjct 402557 ACAGCCCGGCCTCGATCATCGGCACGGACGCCG-CATCG-GCCGCCGCCGCCGT-AGCCC 402613 Query 296 AGTTGGGGCTTTGCCATTACGCCTGAGGCGCTGTCGGCCG-TTGCCCACAATATCGGTGA 354 || |||||||| ||| || || | | ||| | || | | |||| | | | || || Sbjct 402614 AG-TGGGGCTTCCACATCACCCCCGGAGAGCT-TGAGCAGCTGGCCCGCGACGTGGGCGA 402671 Query 355 AACCACCATCCTGGCACGTGCCGGCGGCGCGCCGACTCTGG 395 | | | |||||| | || || |||||||| ||||| |||| Sbjct 402672 ACACTCGATCCTGTCGCGCGCGGGCGGCGCCCCGACGCTGG 402712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1161582587616