Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq763 116 1e-23 >seq763 Length=251843 Score = 116 bits (128), Expect = 1e-23 Identities = 177/251 (71%), Gaps = 6/251 (2%) Strand=Plus/Minus Query 129 TGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCGATCACG 188 || |||||| |||||||| || | ||| | |||| ||| |||||||||||| ||| Sbjct 241776 TGCACCTTGCGGATGAAGTGCTTGATCATTTCCTCGGCGACTTCGAAGTCGGCGATGACG 241717 Query 189 CCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATGCGCTTG 248 ||||| |||||| || ||||| | |||| || || || ||||| ||||| ||||| Sbjct 241716 CCGTCACGCATCGGGCGGATGGCTTCCATATGACCCGGGGTGCGGCCCAGCATCTGCTTG 241657 Query 249 GCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCATGGGTCCGAATGGCCACAACC 308 |||||| |||| || || ||| | || | || | || | || || || Sbjct 241656 GCCTCGATGCCCACAGCGTGGACGATCTTGCGTCCGCCGACATTACGCAGCGCAACGACT 241597 Query 309 GATGGCTCATTCAGGACGATACC---GCGCTCGCGCACGTAAATAAGGGTGTTGGCAGTG 365 || ||||||||||||||||| || || || | ||| || ||||||||||| ||| Sbjct 241596 GACGGCTCATTCAGGACGATGCCTTTGCCCTTTTG---GTAGATCAGGGTGTTGGCGGTG 241540 Query 366 CCCAGGTCAAT 376 |||||||| || Sbjct 241539 CCCAGGTCCAT 241529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1353579709536