Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= AAMG01002011.1 Length=284 Score E Sequences producing significant alignments: (Bits) Value seq713 141 2e-31 seq1291 107 3e-21 seq542 84.2 4e-14 >seq713 Length=1192841 Score = 141 bits (156), Expect = 2e-31 Identities = 185/254 (73%), Gaps = 3/254 (1%) Strand=Plus/Minus Query 12 GCCGCTGGATTTCGCGGTGTTCCCGAC-GTATTCTGCAGGTGGCGACCCTGCTACGTCTG 70 ||||||||| ||| | | |||||||| || ||| | | ||||| |||| || ||| Sbjct 531247 GCCGCTGGAATTCTCCGCCTTCCCGACCGTCCTCTTGATCT--CGACCATGCTGCGGCTG 531190 Query 71 GCATTGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGGCCATGCCGCT 130 | |||||| ||||||| |||||| || | || ||||| || || ||| ||||| Sbjct 531189 TCGTTGAACCTCGCCTCGACGCGGCTGATCCTGTCGCACGGGCACGAAGGCTCCGCCGCC 531130 Query 131 GCCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTCGGT 190 ||||| | || ||| |||| ||||| | | ||||| ||||| |||| ||| |||| Sbjct 531129 GCCGGCCACGTCATCGAGGCGTTCGGCAATTTCGTGATGGGCGGCAACTTCGTCATCGGC 531070 Query 191 ATCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAAGGGCGCCGGG 250 ||| | ||||||||||||||| ||||| | ||||| ||||| | |||||||| | || Sbjct 531069 ATCATCGTGTTCGCGATCCTGGTGATCGTGAACTTCGTGGTCATCACCAAGGGTTCGGGC 531010 Query 251 CGGATTTCCGAGGT 264 || || |||| || Sbjct 531009 CGCATCGCCGAAGT 530996 >seq1291 Length=542012 Score = 107 bits (118), Expect = 3e-21 Identities = 189/274 (69%), Gaps = 1/274 (0%) Strand=Plus/Minus Query 9 GCGGCCGCTGGATTTCGCGGTGTTCCCGACGTATTCTGCAGGTGGCGACCCTGCTACGTC 68 |||||||||||||||||| | ||||| ||| | |||| ||| |||||||| | || | Sbjct 184494 GCGGCCGCTGGATTTCGCCATCTTCCCCACG-GTGCTGCTGGTTTCGACCCTGTTCCGCC 184436 Query 69 TGGCATTGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGGCCATGCCG 128 ||| ||||| | ||||| ||||| || | || ||||| ||||| || || | || Sbjct 184435 TGGGCCTGAACCTGGCCTCGACGCGCCTGATCCTGACGCACGGTCAGGAAGGTCACGACG 184376 Query 129 CTGCCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTCG 188 | || ||| |||| ||| | ||||| ||| || || |||| || || || | | | ||| Sbjct 184375 CGGCGGGTCAGGTCATCAACGCCTTTGGTCAGTTGATGATGGGGGGCAATTTCATCATCG 184316 Query 189 GTATCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAAGGGCGCCG 248 | | | | ||||| ||| | || | | ||||| || || | |||||||| | Sbjct 184315 GGGTGATCATCTTCGCCATCATCCTGGTGGTGAACTTCGTCGTCATCACCAAGGGTTCGA 184256 Query 249 GGCGGATTTCCGAGGTGAGCGCGCGGTTTACCCT 282 ||||| |||| ||| || || || ||||| Sbjct 184255 CCCGGATCGCCGAAGTGTCGGCCCGCTTCACCCT 184222 >seq542 Length=363215 Score = 84.2 bits (92), Expect = 4e-14 Identities = 185/276 (67%), Gaps = 1/276 (0%) Strand=Plus/Minus Query 9 GCGGCCGCTGGATTTCGCGGTGTTCCCGACGTATTCTGCAGGTGGCGACCCTGCTACGTC 68 ||| ||||| || || | | || || ||| | |||| | | || ||| || | || | Sbjct 12976 GCGCCCGCTAGACTTTTCCGCCTTTCCAACGG-TGCTGCTGATCGCCACCATGATGCGAC 12918 Query 69 TGGCATTGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGGCCATGCCG 128 || | |||| |||| | || || ||| | | ||||||| | || ||| || | Sbjct 12917 TGTCGCTGAATATCGCGACGACACGCGTGATTCTCACCCACGGCAATGAAGGCTATCTTG 12858 Query 129 CTGCCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTCG 188 | |||||| | |||||||| | |||| | | ||||| ||||| ||| ||| ||| Sbjct 12857 CCGCCGGTCATGTGATCCACGGCTTCTCGCAATTCGTGATGGGCGGCGACTTCGTCATCG 12798 Query 189 GTATCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAAGGGCGCCG 248 || | || || ||| || || || ||| ||||||| | || | ||||||||||| Sbjct 12797 GTCTGGTCGTTTTCTGCATTCTCATCATCGTCAACTTCCTCGTCATCACCAAGGGCGCGA 12738 Query 249 GGCGGATTTCCGAGGTGAGCGCGCGGTTTACCCTCG 284 ||| || | || ||| ||||||| || || |||| Sbjct 12737 CGCGTATCGCGGAAGTGGGCGCGCGCTTCACTCTCG 12702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 809588243343