Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= AAMG01002049.1 Length=571 Score E Sequences producing significant alignments: (Bits) Value seq812 123 9e-26 seq752 78.8 3e-12 >seq812 Length=1388629 Score = 123 bits (136), Expect = 9e-26 Identities = 161/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 16 TTCAGGTCGTTCCGGGTCAAGGTCGGCCAGGGCTTCCTGATGATCTTCACCGGTCTAGTT 75 ||| |||||||||| ||| ||| |||| |||||||||||||| | || || | | Sbjct 645792 TTCTGGTCGTTCCGCATCATGGTGGGCCTCGGCTTCCTGATGATGGGCCTTGGCCT-GCT 645734 Query 76 CAGCCAGTGGCTAGCGCCGGGGCGACAAGATGTACACGTCCAAGCCGTTCCTGTACCTGG 135 ||||| |||||| |||| || ||| || ||| || | | |||| | | | | | Sbjct 645733 CAGCCTGTGGCT-GCGCTGGCGCGGCAGGATTTATGACTACCGGCCGCTGCACATCTTCG 645675 Query 136 CGTTGTGGATGGGCCCGTCCGGGTTGATCGCGATTCTCGCCGGCTGGTTCACCACGGAAA 195 || || |||||| || ||||| || |||||| | || || ||||||||||| |||||| Sbjct 645674 CGATGATGATGGGACCATCCGGATTCATCGCGGTGCTGGCGGGCTGGTTCACAACGGAAG 645615 Query 196 TCGGCCGTCAGCCGTGGGTGGTCTACGGCCTGATGCGCAC 235 | ||||| || |||| ||||||||||||| ||||||| Sbjct 645614 TGGGCCGGCAACCGTTCACGGTCTACGGCCTGCTGCGCAC 645575 >seq752 Length=262051 Score = 78.8 bits (86), Expect = 3e-12 Identities = 76/98 (78%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 144 ATGGGCCCGTCCGGGTTGATCGCGATTCTCGCCGGCTGGTTCACCACGGAAATCGGCCGT 203 ||||| ||| || || |||| | || ||||||||| ||||||| || |||||||| Sbjct 125088 ATGGGGCCGATGGGCTTCGTCGCCGTGCTGGCCGGCTGGATCACCACCGAGGTCGGCCGT 125147 Query 204 CAGCCGTGGGTGGTCTACGGCCTGATGCGCACGGCGGA 241 ||||| ||| |||||||||||| ||||||| || || Sbjct 125148 CAGCCCTGGACCGTCTACGGCCTGTTGCGCACCGCCGA 125185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1724774145248