Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq1291 102 1e-19 seq693 77.0 5e-12 >seq1291 Length=542012 Score = 102 bits (112), Expect = 1e-19 Identities = 153/211 (73%), Gaps = 5/211 (2%) Strand=Plus/Plus Query 81 TCCAACCTGAGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCA-CTCGCT 139 |||| | | ||| |||| | || ||||| | | || ||||| || ||||| | || || Sbjct 450797 TCCATCTTCAGCGCCGCGATAAACGCTTCCT-GCGGGATTTCGACCTTGCCGAACTGGCG 450855 Query 140 TCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCAC 199 ||| || || || |||||||| |||||||| |||||||| ||| ||| | |||| | Sbjct 450856 -CATCCGCTTCTTGCCGGCCTTCTGCTTCTCCAGCAGCTTCTTCTTGCGGGTGGCGTCGC 450914 Query 200 CGCCGTAGCATTTGGCCAGT-ACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATG 258 |||||||||| || || || |||| ||| | |||||| |||| || || ||| Sbjct 450915 CGCCGTAGCACTT-GCTGGTCACGTCCTTGCGCAGAGCCCGCACGGTTTCGCGGGCGATG 450973 Query 259 ATCTGCCCGCCAATGGCGGCCTGGATCGCGA 289 |||| ||||| ||||| ||||| |||| || Sbjct 450974 ATCTTGCCGCCGATGGCCGCCTGAATCGGGA 451004 >seq693 Length=350174 Score = 77.0 bits (84), Expect = 5e-12 Identities = 145/212 (68%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 78 CTATCCAACCTGAGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCG 137 ||||||| | | ||| | |||| ||| ||||| | | || || || || ||||| | | Sbjct 117688 CTATCCACCTTCAGCGCGGCAATGAAAGCTTCCT-GCGGGATGTCGACTTTGCCGAACTG 117630 Query 138 CTTCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTC 197 | ||| || || || |||| |||||||| || || |||||||| ||| | | ||| Sbjct 117629 CCGCATCTTCTTCTTGCCTTCCTTCTGCTTCTCCAGAAGTTTGCGCTTGCGGGTGATGTC 117570 Query 198 ACCGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAAT 257 ||||||||||| || || |||| ||| | || || ||| | ||||| || Sbjct 117569 GCCGCCGTAGCACTTCGCGGTGACGTCCTTGCGCAGCGCGCGGACCGTTTCGCGCGCGAT 117510 Query 258 GATCTGCCCGCCAATGGCGGCCTGGATCGCGA 289 | || ||||| || || ||||| |||| || Sbjct 117509 CACCTTGCCGCCGATCGCCGCCTGAATCGGGA 117478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838387432384