Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= AAMG01002110.1 Length=382 Score E Sequences producing significant alignments: (Bits) Value seq998 114 3e-23 seq724 107 4e-21 >seq998 Length=1052685 Score = 114 bits (126), Expect = 3e-23 Identities = 113/144 (78%), Gaps = 3/144 (2%) Strand=Plus/Plus Query 237 CTCAGCCCTCCACCACCCAGGTGTCCTTGGTTCCACCGCCTTGCGACGAGTTGACGACCA 296 |||| | || | |||||||||||||||||| || ||||| || |||||| || |||| Sbjct 212358 CTCATTCATCGAGCACCCAGGTGTCCTTGGTGCCGCCGCCCTGACTCGAGTTCACCACCA 212417 Query 297 GCGAGCCTTCCTTCAGCGCCACGCGGGTCAAGCCACCGGGCACCA-GGCG--GGTTTCCT 353 ||||||||||||| ||||| |||||||| | ||| || ||||| | || | | |||| Sbjct 212418 GCGAGCCTTCCTTTAGCGCGACGCGGGTGAGGCCGCCCGGCACGACGGTGACGTCATCCT 212477 Query 354 TGCCCGAGAGCACGAAGGGTCGCA 377 |||| | ||| |||||||| |||| Sbjct 212478 TGCCGGTGAGGACGAAGGGCCGCA 212501 >seq724 Length=279373 Score = 107 bits (118), Expect = 4e-21 Identities = 166/231 (72%), Gaps = 7/231 (3%) Strand=Plus/Minus Query 156 TCCAGCATGCGTGCCAGGTTCTCGGCGCGCTCCAGGTAACGCGACATCCAATACAGATCT 215 ||||| || || || ||| || || ||||||| ||| || |||| ||||| || Sbjct 70188 TCCAGAATCCGCGCAAGGAAATCCGCCCGCTCCATGTAGCGGCCGGTCCAGTACAGG-CT 70130 Query 216 G-CAGCTGTTCTACGCAGCATACTCAGCCCTCCACCACCCAGGTGTCCTTGGTTCCACCG 274 | | ||||| | ||||| || || |||| ||||||||||||||||||||| ||| Sbjct 70129 GTCTGCTGTGCGTGAGAGCAT-CT-AGTTGTCCAGCACCCAGGTGTCCTTGGTTCCGCCG 70072 Query 275 CCTTGCGACGAGTTGACGACCAGCGAGCCTTCCTTCAGCGCCACGCGGGTCAAGCCACCG 334 || || ||||| || ||||| ||||| || ||||||||||| || |||| ||| ||| Sbjct 70071 CCCTGGCTGGAGTTCACCACCAGAGAGCCCTCTTTCAGCGCCACCCGCGTCAGGCCGCCG 70012 Query 335 GGCACCAGGCG---GGTTTCCTTGCCCGAGAGCACGAAGGGTCGCAAGTCG 382 ||| | | ||| | | || | || ||||||||||| |||| |||| Sbjct 70011 GGCGCGACGCGCACGCCTGCCGGACTGGACAGCACGAAGGGACGCAGGTCG 69961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1119983211200