Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq249 430 3e-118 seq966 381 1e-103 seq917 358 2e-96 seq1212 311 2e-82 seq67 239 1e-60 >seq249 Length=9465 Score = 430 bits (476), Expect = 3e-118 Identities = 336/400 (84%), Gaps = 2/400 (1%) Strand=Plus/Minus Query 9 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 68 || |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct 8459 GAAGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTG 8400 Query 69 TCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCT 128 | |||| ||||||||||||||| | |||||| || | ||||||||| ||||||| | Sbjct 8399 TTCGGATTTACTGGGCGTAAAGCGCACGTAGGCGGACTTTTAAGTCAGGGGTGAAATCCC 8340 Query 129 ATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTG 188 ||||||||||||| ||||| ||||| |||| | | || |||| | || || |||| Sbjct 8339 GGGGCTCAACCCCGGAACTGCCTTTGATACTGGAAGTCTTGAGTATGGTAGAGGTGAGTG 8280 Query 189 GAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCG 248 ||||||| ||||||| |||||||| |||||||||| |||||||||||||||||||||||| Sbjct 8279 GAATTCCGAGTGTAGAGGTGAAATTCGTAGATATTCGGAGGAACACCAGTGGCGAAGGCG 8220 Query 249 GCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGAT 308 ||| |||||| | |||||| |||||| |||||||||||||||||||||||||||||| Sbjct 8219 GCTCACTGGACCATTACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGAT 8160 Query 309 ACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCG 368 ||||||||||||||||||||||||||||||| ||| || |||| | || || || Sbjct 8159 ACCCTGGTAGTCCACGCCGTAAACGATGAATGTTAGCCGTTGGGGAGTTTA--CTCTTCG 8102 Query 369 GTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 ||| |||||| |||||| ||| ||||| ||||||||||| Sbjct 8101 GTGGCGCAGCTAACGCATTAAACATTCCGCCTGGGGAGTA 8062 >seq966 Length=90452 Score = 381 bits (422), Expect = 1e-103 Identities = 325/400 (81%), Gaps = 2/400 (1%) Strand=Plus/Plus Query 9 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 68 || |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct 88947 GAAGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTG 89006 Query 69 TCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCT 128 |||||||||||||||||||||| ||||||| || ||||||||| ||||||| | Sbjct 89007 CTCGGAATTACTGGGCGTAAAGGGAGCGTAGGCGGACATTTAAGTCAGGGGTGAAATCCC 89066 Query 129 ATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTG 188 ||||||||| ||| | ||| ||||| |||| | || |||| ||| || ||| Sbjct 89067 GGGGCTCAACCTCGGAATTGCCTTTGATACTGGGTGTCTTGAGTATGAGAGAGGTGTGTG 89126 Query 189 GAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCG 248 ||| ||| ||||||| |||||||| |||||||||| ||| |||||||||||||||||||| Sbjct 89127 GAACTCCGAGTGTAGAGGTGAAATTCGTAGATATTCGGAAGAACACCAGTGGCGAAGGCG 89186 Query 249 GCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGAT 308 | |||| | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct 89187 ACACACTGGCTCATTACTGACGCTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGAT 89246 Query 309 ACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCG 368 ||||||||||||||||||||||||||||||| | || || | | | || | | Sbjct 89247 ACCCTGGTAGTCCACGCCGTAAACGATGAATGCCAGCCGTTAGTGGGTTTA--CTCACTA 89304 Query 369 GTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 ||| |||||| ||||| |||| ||||| ||||||||||| Sbjct 89305 GTGGCGCAGCTAACGCTTTAAGCATTCCGCCTGGGGAGTA 89344 >seq917 Length=2224 Score = 358 bits (396), Expect = 2e-96 Identities = 320/399 (80%), Gaps = 9/399 (2%) Strand=Plus/Minus Query 10 AGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTAT 69 || ||||| |||||||||| |||||||||||||||||||||| |||| ||| |||||||| Sbjct 1832 AGAAAGCCACGGCTAACTATGTGCCAGCAGCCGCGGTAATACATAGGTGGCAAGCGTTAT 1773 Query 70 CCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTA 129 ||||| ||| ||||||||||| |||||||| ||||| ||||| ||| | ||| Sbjct 1772 CCGGATTTATTGGGCGTAAAGCGTGCGTAGACGGTTTTGCAAGTCTGAGATTAAATTTAG 1713 Query 130 TGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGG 189 ||||||||||| || || || |||||| || ||||||| ||||| || ||||| Sbjct 1712 GGGCTCAACCCCTA-ACCGCCTTGGAAACTACATTACTAGAGTATAGGAGAGGTTAGTGG 1654 Query 190 AATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGG 249 |||| | ||||||||||| ||||||||||||| | ||||||||||||||||||||||| Sbjct 1653 AATTTCATGTGTAGCGGTGGAATGCGTAGATATATGAAGGAACACCAGTGGCGAAGGCGG 1594 Query 250 CTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATA 309 || |||| || | |||||| || ||| ||||||||||||||||||| ||||||||||| Sbjct 1593 CTAACTGGCCTATTACTGACGTTGTGGCACGAAAGCGTGGGGAGCAAATAGGATTAGATA 1534 Query 310 CCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGG 369 |||| ||||||||||||||||||||||| ||||| |||| | ||| || | | Sbjct 1533 CCCTAGTAGTCCACGCCGTAAACGATGAGTACTAAGTGTTG----CCATGAG----GCAG 1482 Query 370 TGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 ||| | ||| |||||| |||||| ||| |||| | |||| Sbjct 1481 TGCTGTAGCTAACGCATTAAGTACTCCGCCTGAGTAGTA 1443 >seq1212 Length=36954 Score = 311 bits (344), Expect = 2e-82 Identities = 270/333 (81%), Gaps = 4/333 (1%) Strand=Plus/Plus Query 9 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 68 || |||| || |||||||| |||||||||||||||||||||||| || |||||||||||| Sbjct 1407 GAAGAAGTCCTGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGAGGGCTAGCGTTA 1466 Query 69 TCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCT 128 | |||||||| ||||||||||||| ||||||| | || ||||| | | |||||| | Sbjct 1467 TTCGGAATTATTGGGCGTAAAGGGCGCGTAGGCTGGTTAATAAGTTAAAAGTGAAATCCC 1526 Query 129 ATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAG--TGCAGGAGGGGCAAG 186 |||| |||| || | ||||||| ||||| |||||| || | |||| || Sbjct 1527 GAGGCTTAACCTTGGAATTGCTTTTAAAACTATTAATCTAGAGATTGAAAGAGGAT--AG 1584 Query 187 TGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGG 246 ||||||||| ||||| ||| |||| |||| |||||||||||||||||||||||||||| Sbjct 1585 AGGAATTCCTGATGTAGAGGTAAAATTCGTAAATATTAGGAGGAACACCAGTGGCGAAGG 1644 Query 247 CGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAG 306 || || |||| | ||||| |||| || |||| ||||||||||||||||||||||| Sbjct 1645 CGTCTATCTGGTTCAAATCTGACGCTGAAGCGCGAAGGCGTGGGGAGCAAACAGGATTAG 1704 Query 307 ATACCCTGGTAGTCCACGCCGTAAACGATGAAT 339 ||||||||||||||||||| ||||||||||||| Sbjct 1705 ATACCCTGGTAGTCCACGCTGTAAACGATGAAT 1737 >seq67 Length=373 Score = 239 bits (264), Expect = 1e-60 Identities = 242/313 (77%), Gaps = 9/313 (3%) Strand=Plus/Plus Query 96 GTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGA 155 |||| ||||| ||||| ||||| ||| ||||||||||| || || || || Sbjct 1 GTAGACGGTTTTGCAAGTCTGAGGTTAAATTTAGGGGCTCAACCCCTA-ACCGCCTTGGA 59 Query 156 AACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCG 215 |||| || ||||||| ||||| || ||||||||| | ||||||||||| |||||| Sbjct 60 AACTACATTACTAGAGTATAGGAGAGGTTAGTGGAATTTCATGTGTAGCGGTGGAATGCG 119 Query 216 TAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAG 275 ||||||| | |||||||||||||||||| |||||| |||| || | |||||| || | Sbjct 120 TAGATATATGAAGGAACACCAGTGGCGAAAGCGGCTAACTGGCCTATTACTGACGTTGTG 179 Query 276 GCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGAT 335 || ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| Sbjct 180 GCACGAAAGCGTGGGGAGCAAATAGGATTAGATACCCTAGTAGTCCACGCCGTAAACGAT 239 Query 336 GAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTC 395 || ||||| |||| | ||| || | |||| | || |||||| |||||| || Sbjct 240 GAGTACTAAGTGTTG----CCATGAG----GCAGTGCTGTAGTTAACGCATTAAGTACTC 291 Query 396 CACCTGGGGAGTA 408 | |||| | |||| Sbjct 292 CGCCTGAGTAGTA 304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203181964032