Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09] 1,499 sequences; 18,613,147 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq20 196 9e-48 seq917 134 3e-29 seq249 109 1e-21 seq843 102 1e-19 >seq20 Length=12842 Score = 196 bits (216), Expect = 9e-48 Identities = 241/323 (75%), Gaps = 16/323 (5%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || |||| || |||||||||||||| | | |||||||||||||||| | || ||||||| Sbjct 9490 AGAGCACTTGATGGATGCCTTGGCGTTAAGAGGCGATGAAGGACGTGGCAGGCTGCGATA 9549 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 ||||| ||| | | | |||| | |||||||||||||||||||||||||||||||| | Sbjct 9550 AGCTGTGGGAAAT-TGTCAACAAATTTTGATCCGCAGATTTCCGAATGGGGAAACCCAAC 9608 Query 121 --CCTTTG--GGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTG 176 ||| | || ||| || |||| || |||| ||||| ||| || |||||| Sbjct 9609 TAGCTTAGCTAGTTATT--AT-----ATAC-TAAGTATATAAAGCAAACTTGGTGAACTG 9660 Query 177 AAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCG 236 ||| ||||||||||| |||||||||||||||||||||||| ||||||| |||||| Sbjct 9661 AAATATCTAAGTAGCCAAAGGAAAAGAAATCAACCGAGATTCTGTTAGTAGTGACGAGCG 9720 Query 237 AAATGGGATGAGCCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAG 296 ||| ||| || || | ||| ||| | | |||| |||||||||| | | Sbjct 9721 AAAGCGGAAAAGGCT---AGTGATTTAAAAATAAGAATTAGAATACTCTGGAAATGGTAA 9777 Query 297 CCATAGCGGGTGATAGCCCCGTA 319 |||||| |||||||| || ||| Sbjct 9778 CCATAGAAGGTGATAGTCCTGTA 9800 >seq917 Length=2224 Score = 134 bits (148), Expect = 3e-29 Identities = 184/252 (73%), Gaps = 9/252 (4%) Strand=Plus/Minus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 |||||||||||||||| | || |||||||||||| | | ||||||||||| || Sbjct 583 ATGGTGGATGCCTTGGAATTGGAAGACGATGAAGGACGCGATTACCTGCGATAAGCTTCG 524 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC-GGCCCTTT- 125 ||||| | ||| | |||||||||| |||| ||||||||||||||||| |||| Sbjct 523 GGGAG-CTGGAAATAAGCTTTGATCCGGAGATGTCCGAATGGGGAAACCCACTATCTTTA 465 Query 126 ---GGGT--CATTGCATGCTGAATACATAGGTATGCAAAGCGA-ACGCGGCGAACTGAAA 179 | | | || | ||||| ||||| | |||| || || || | ||| ||||| Sbjct 464 ATCAGATAGTACTGTACAATGAATTCATAGTTGTGCAGAGTGATACCTAGAGAATTGAAA 405 Query 180 CATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAA 239 ||||| |||| || ||||||||||| | | | ||||||| ||||| ||||||||||| Sbjct 404 CATCTTAGTACCTAGAGGAAAAGAAAGCGAATGCGATTCCCTTAGTAGCGGCGAGCGAAA 345 Query 240 TGGGATGAGCCT 251 |||| ||||| Sbjct 344 AGGGAGCAGCCT 333 >seq249 Length=9465 Score = 109 bits (120), Expect = 1e-21 Identities = 95/117 (81%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| |||||||||||||||| |||||||||||||||||| || ||||||| Sbjct 6641 AGGGCATTTGGTGGATGCCTTGGCATGCACAGGCGATGAAGGACGTGATACGCTGCGATA 6582 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC 117 ||| ||||||| | || || || |||||||||| ||||||||||||||| ||||| Sbjct 6581 AGCGTCGGGGAG-GTGCGAATACCCTTTGATCCGACGATTTCCGAATGGGGCAACCC 6526 Score = 98.7 bits (108), Expect = 2e-18 Identities = 133/182 (73%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 139 CTGAATACATAGG-TATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGG 197 ||||||||||||| | | |||||||| || ||||||||||||||||||| | ||| Sbjct 6440 CTGAATACATAGGGTGTTAGAAGCGAACCTGGGGAACTGAAACATCTAAGTACCCAGAGG 6381 Query 198 AAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCTTTACGA 257 ||| || ||||| ||||| ||| |||||||||||||||| ||| || | | Sbjct 6380 AAAGGACATCAAACGAGACTCCGCTAGTAGTGGCGAGCGAACGCGGACCAGGCCAGTGGC 6321 Query 258 GATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCATAGCGGGTGATAGCCCCG 317 |||| |||| | ||||||| ||||||| ||| || |||||||||||||| Sbjct 6320 AATAG-GGAAT--AAAGTGGAAGAACCTGGAAAGGTTTGCCGAAGTGGGTGATAGCCCCG 6264 Query 318 TA 319 || Sbjct 6263 TA 6262 >seq843 Length=2902 Score = 102 bits (112), Expect = 1e-19 Identities = 88/108 (81%), Gaps = 1/108 (1%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 |||||||||||||||| | | |||||||||||||||| || |||||||||| | ||| Sbjct 1783 GGTGGATGCCTTGGCGCTGAGAGGCGATGAAGGACGTGCTACGCTGCGATAAGCCGTGGG 1724 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC 117 ||| || || | ||||||||| ||||||||||||||||||||| Sbjct 1723 GAG-CTGCGAAGAAGCTTTGATCCATGGATTTCCGAATGGGGAAACCC 1677 Score = 98.7 bits (108), Expect = 2e-18 Identities = 83/101 (82%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 139 CTGAATACATAGGTA-TGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGG 197 ||||||||||||| | |||||||| | | ||||||||||||||||||| ||| ||| Sbjct 1589 CTGAATACATAGGGGGTTTTAAGCGAACCCAGGGAACTGAAACATCTAAGTACCTGGAGG 1530 Query 198 AAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 ||| || |||||| |||| ||| |||||||||||||||| Sbjct 1529 AAAGGACATCAACAGAGACTCCGTTAGTAGTGGCGAGCGAA 1489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918386233184