Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_009552.2
Length=40863
Score E
Sequences producing significant alignments: (Bits) Value
seq1482 273 6e-69
seq743 215 1e-51
seq890 159 9e-35
>seq1482
Length=483770
Score = 273 bits (302), Expect = 6e-69
Identities = 450/647 (70%), Gaps = 8/647 (1%)
Strand=Plus/Plus
Query 37694 GGCGTCGAAAAAGAAGACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTC 37753
||||| || || | ||||| || ||| ||| ||||||||||||||||||| |||
Sbjct 421420 GGCGTGGAGAAGCACGACCGCACCGGCACCGGAACGCTGTCGGTGTTCGGCCATCAGACG 421479
Query 37754 CGCTTCAACTTACAAGATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGC--- 37810
||| ||| || | ||||| ||||| | || ||||| || || |||||
Sbjct 421480 CGCCACAATTTGGCCGCAGGATTCCCGCTGCTCACGACGAAGAA---GC-TATCCCTCAA 421535
Query 37811 -TCCATCATTTATGAACTGCTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCA 37869
|| ||| | |||| ||||| |||||| | || ||||| || ||| || || | |
Sbjct 421536 ATCGATCGTCCATGAGCTGCTCTGGTTTCTGAAGGGCGACACCAACATCAAGTACCTCAA 421595
Query 37870 GGAGAATGGCGTGACGATTTGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGAT 37929
||| | ||||| |||| |||||||||||||||||||| |||||||||||||| ||| |
Sbjct 421596 GGACCACGGCGTCTCGATCTGGGATGAGTGGGCGGACGAGAACGGCGATCTCGGTCCGGT 421655
Query 37930 TTACGGCGCGCAATGGCGCTCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGC 37989
|| || |||| ||||| || ||| | | ||||| | |||||| ||||||||
Sbjct 421656 CTATGGTTCGCAGTGGCGTTCATGGCCCGCGCCGGACGGCCGCAGCATCGATCAGATCGC 421715
Query 37990 ATGGGTTGTCGAAGAGATCAAACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTG 38049
|| ||||| |||| || |||||| |||| || |||||| | || || ||
Sbjct 421716 CAACGTCGTCGAGATGATCCGGCGCAATCCGGATTCGCGGCGGCTGATCGTCTCGGCGTG 421775
Query 38050 GAATGTAGCAGAATTGGACGAGATGAAGCTGCCGCCGTGTCATTACGCCTTTCAGTTCTA 38109
|||| || || | || ||||| |||||| ||||| |||| | |||||||||||
Sbjct 421776 GAATCCCGCCGAGGTCGATAAGATGGCGCTGCCCCCGTGCCATTGCCTGTTTCAGTTCTA 421835
Query 38110 TGTCGCCAACGGCCGGTTGTCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGG 38169
||||||||||||| |||| ||| | | |||||||||| |||| || | ||
Sbjct 421836 TGTCGCCAACGGCAAACTGTCGTGCCAGCTCTATCAGCGCTCCGCTGATGTCTTCCTCGG 421895
Query 38170 GTTGCCGTTTAACATCGCGAGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGA 38229
||||||| |||||||| ||| |||||| ||||| ||||| || || ||
Sbjct 421896 CGTGCCGTTCAACATCGCATCCTATGCGCTGCTGACGATGATGGTCGCACAGGTCACCGG 421955
Query 38230 CTTGGATGTCGGTGAACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCT 38289
|||| | | || ||| ||||| ||| || |||| ||| | || ||||||||
Sbjct 421956 CTTGAAAGCGGGCGAATTCATTCACACGCTGGGTGACGCGCATCTTTATTCCAATCATCT 422015
Query 38290 GGAACAAGCGAAACTGCAGCTGACGCGCGAGCCGCGCCCGCTGCCGA 38336
|||||| ||| | |||| ||||||||| ||||||| | ||||||
Sbjct 422016 GGAACAGGCGCGATTGCAATTGACGCGCGCGCCGCGCGCATTGCCGA 422062
>seq743
Length=263205
Score = 215 bits (238), Expect = 1e-51
Identities = 428/633 (68%), Gaps = 12/633 (2%)
Strand=Plus/Minus
Query 37709 GACCGAACGGGCGTCGGCACGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAACTTACAA 37768
||||| || ||| || ||||||||||||||||| | ||| | ||||||||| |
Sbjct 73483 GACCGCACCGGCACGGGTACGCTGTCGGTGTTCGGTCATCAGATGCGCTTCAACCTCGCC 73424
Query 37769 GATGGATTTCCGCTCGTGACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTG 37828
| || |||||| | ||| || ||||| ||| || | || | | ||||||
Sbjct 73423 GCCGGTTTTCCGATGACGACGACCAAAAAGCTGCCGTTCAAGGCGATTGTCCACGAACTG 73364
Query 37829 CTTTGGTTTTTAAAAGGCGATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATT 37888
|| |||||| | ||||| || ||||| |||||| ||||| | ||||| || || ||
Sbjct 73363 CTGTGGTTTCTCGCCGGCGACACCAACGTGCGCTATCTGCAGAATAATGGTGTCACCATC 73304
Query 37889 TGGGATGAGTGGGCGGACGAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGC 37948
||||| ||||||||||||| ||||| ||||| || ||| | |||||| ||| ||||||
Sbjct 73303 TGGGACGAGTGGGCGGACGCCAACGGGGATCTTGGTCCGGTCTACGGCAAGCAGTGGCGC 73244
Query 37949 TCGTGGAAGGGAGCAGACGGGAAAACCATCGACCAGATCGCATGGGTTGTCGAAGAGATC 38008
|| ||| ||| | || || | ||||||||||||||| | || ||||
Sbjct 73243 TCATGGCAGGCGCCGGATGGCCGCAGCATCGACCAGATCGCGAACCTCATCCGCATGATC 73184
Query 38009 AAACGAAATCCGCATTCACGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTGGAC 38068
| ||| |||| || |||||| | || ||||| |||||| || || | ||
Sbjct 73183 CGCACCACGCCGGATTCGCGGCGGCTGATCGTCAGCGCATGGAATCCGGCCGATGTCGAT 73124
Query 38069 GAGATGAAGCTGCCGCCGTGTCATTACGCCTTTCAGTTCTATGTCGCCAACGGCCGGTTG 38128
| ||| ||||||||| || |||| | || |||||||| ||||| |||||| |
Sbjct 73123 CACATGGCGCTGCCGCCATGCCATTGCCTGTTCCAGTTCTACGTCGCGAACGGCAAACTC 73064
Query 38129 TCATGCATGTGGCAGCAGCGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACATCGCG 38188
|| ||| | | ||||| || | || |||| | || ||||||| |||||||||
Sbjct 73063 TCGTGCCAGCTCTATCAGCGTTCGGCCGACGTGTTTCTCGGCGTGCCGTTCAACATCGCG 73004
Query 38189 AGCTACGCGCTGTTGACGCATATGGTAGCCCAACAATGCGACTTGGATGT------CGGT 38242
||| |||||| ||||| ||| | || | | | ||| |||| | ||
Sbjct 73003 TCCTATGCGCTGCTGACGATGATGATCGCAC----AGGTGAC--GGATCTTGCGCCGGGC 72950
Query 38243 GAACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAA 38302
|| |||| ||| |||||||| ||| |||| || |||||||| || |||
Sbjct 72949 GATTTCATCCACACGCTCGGCGACGCGCATCTGTATTCCAACCATCTGGAGCAGGCGCGC 72890
Query 38303 CTGCAGCTGACGCGCGAGCCGCGCCCGCTGCCG 38335
||||| |||||||| ||||||| ||||||||
Sbjct 72889 CTGCAACTGACGCGGCGGCCGCGCGCGCTGCCG 72857
>seq890
Length=125401
Score = 159 bits (176), Expect = 9e-35
Identities = 441/671 (66%), Gaps = 4/671 (1%)
Strand=Plus/Minus
Query 37668 ACTTGCTGCAAGACATCTTAGAAAACGGCGTCGAAAAAGAAGACCGAACGGGCGTCGGCA 37727
|| |||||| |||||| | || || ||||| || ||||| || ||| |||||
Sbjct 47762 ACCTGCTGCGCGACATCCTCGACAATGGCGTGCGCCGCGACGACCGCACCGGCACCGGCA 47703
Query 37728 CGCTGTCGGTGTTCGGCCGCCAGCTCCGCTTCAA-CTTACAAGATGGATTTCCGCTCGTG 37786
| ||| || ||||| |||||| | ||||| | || | | | || || || || ||
Sbjct 47702 CCCTGGGCGTCTTCGGTCGCCAGATTCGCTTTGATCTGGCCA-AGGGCTTCCCCGTCCTG 47644
Query 37787 ACAACGAAAAAATTGCATATCCGCTCCATCATTTATGAACTGCTTTGGTTTTTAAAAGGC 37846
|| || || || |||| | || || ||||| |||||||| ||||| | |||
Sbjct 47643 ACCACCAAGAAGCTGCACCTGCGTTCGATCATCATCGAACTGCTGTGGTTCCTGCGCGGC 47584
Query 37847 GATACGAACGTCCGCTATTTGCAGGAGAATGGCGTGACGATTTGGGATGAGTGGGCGGAC 37906
|| || ||| || ||| | ||||||| ||||| || |||||||| ||||| |||
Sbjct 47583 GAGACCAACATCGGCTGGCTCAAGGAGAACGGCGTCCGCATCTGGGATGAATGGGCAGAC 47524
Query 37907 GAAAACGGCGATCTCGGCCCGATTTACGGCGCGCAATGGCGCTCGTGGAAGGGAGCAGAC 37966
| | ||||| || ||||| | || ||| ||| ||||||||||||| || | |||
Sbjct 47523 GCCGAGGGCGAGCTTGGCCCCGTCTATGGCAAGCAGTGGCGCTCGTGGACGGCGCCGGAC 47464
Query 37967 GGGAAAACCATCGACCAGATCGCATGGGTTGTCGAAGAGATCAAACGAAATCCGCATTCA 38026
|| ||||||||| |||| | || | | | |||| |||||| |
Sbjct 47463 GGCCGCCTCATCGACCAAATCGAGAAACTGGTTCACGGGCTCAAGACCAATCCGAACGGT 47404
Query 38027 CGCCGGCTGCTGGTGAGCGCTTGGAATGTAGCAGAATTGGACGAGATGAAGCTGCCGCCG 38086
|| || | | || ||||| ||||| || || ||||||| ||| |||||||||
Sbjct 47403 CGTCGCCACATCGTCAGCGCCTGGAACCCGGCGGACGTGGACGACATGGCCCTGCCGCCG 47344
Query 38087 TGTCATTACGCCTTTCAGTTCTATGTCGCCAACGGCCGGTTGTCATGCATGTGGCAGCAG 38146
|| || | | || ||||||| ||||| |||| | ||| | | | |||
Sbjct 47343 TGCCACTGCCTGTTCCAGTTCTTCGTCGCAGACGGAAAACTCAGCTGCCAGCTGTATCAG 47284
Query 38147 CGCTCCGTTGATACGTTTTTAGGGTTGCCGTTTAACATCGCGAGCTACGCGCTGTTGACG 38206
|| || || | || | || ||||||| |||||||| |||||| ||| ||||
Sbjct 47283 CGTAGCGCCGACATCTTCCTGGGCGTGCCGTTCAACATCGCCTCCTACGCCCTGCTGACC 47224
Query 38207 CATATGGTAGCCCA-ACAATGCGACTTGGATGTCGGTGAACTCATTTTCACCGGCGGCGA 38265
| ||||| ||||| || | | |||| || || || | ||| ||||||
Sbjct 47223 CTGATGGTGGCCCAGGTCGTGGGTC-TGGAGCCGGGCGAGTTCGTCCATACCTTCGGCGA 47165
Query 38266 CGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAACTGCAGCTGACGCGCGAGCCGCG 38325
|| ||| |||| || ||||||||||| || |||| ||||||||||||||||| |
Sbjct 47164 CGCCCACCTGTATCTGAACCATCTGGAACAGGCCGAACTTCAGCTGACGCGCGAGCCCCT 47105
Query 38326 CCCGCTGCCGA 38336
|| |||||||
Sbjct 47104 GCCCCTGCCGA 47094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130637674526350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |