Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dactylopius_20coccus_20[genbank_20GCA_5F000833685.1_202015-02-09]
1,499 sequences; 18,613,147 total letters
Query= NC_031927.1
Length=216121
Score E
Sequences producing significant alignments: (Bits) Value
seq1300 93.3 6e-14
seq966 93.3 6e-14
seq733 84.2 3e-11
>seq1300
Length=673
Score = 93.3 bits (102), Expect = 6e-14
Identities = 62/69 (90%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 142800 TAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAACGGTTCGAGTCCGTTAT 142859
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 145 TAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCGTCGGTTCGACTCCGTCTG 86
Query 142860 TCTCCACCA 142868
||||||||
Sbjct 85 GCTCCACCA 77
>seq966
Length=90452
Score = 93.3 bits (102), Expect = 6e-14
Identities = 62/69 (90%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 142800 TAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAACGGTTCGAGTCCGTTAT 142859
||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 90309 TAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCGTCGGTTCGACTCCGTCTG 90368
Query 142860 TCTCCACCA 142868
||||||||
Sbjct 90369 GCTCCACCA 90377
>seq733
Length=265776
Score = 84.2 bits (92), Expect = 3e-11
Identities = 67/81 (83%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 142792 CGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAACGGTTCGAG 142851
||||| ||||||||||||||||||||| ||| | ||| ||| || |||| ||||||||
Sbjct 182023 CGGGGCTTTAGCTCAGTTGGTAGAGCGCTTGCATGGCATGCAAGAGGTCAGCGGTTCGAC 181964
Query 142852 TCCGTTATTCTCCACCAACCA 142872
|||| || ||||||||| ||
Sbjct 181963 TCCGCTAAGCTCCACCAATCA 181943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 691446243783240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |