Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017
-06-23] 5,395 sequences; 248,577,651 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq318 174 3e-41
>seq318
Length=176241
Score = 174 bits (192), Expect = 3e-41
Identities = 214/288 (74%), Gaps = 11/288 (4%)
Strand=Plus/Minus
Query 40 TGCCCTTCACTGGGTGTGCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTC 99
||| ||||| || |||| | | ||| | |||||||||||| ||||||||||| ||
Sbjct 11754 TGCTCTTCAGTGAGTGTCGAGATGGGCCGACAATTTTACTTTGAACAAATTAGAGTGCTC 11695
Query 100 AAAGCAGGC------CTTTGCTCGAATACATTA-GCATGGAATAATAGAATAGGACGTGC 152
||||| ||| | ||| ||||| | |||||||||||||||||| || | |
Sbjct 11694 AAAGCGGGCTCAAAACGCCGCTTGAATATTTCGTGCATGGAATAATAGAATATGATCT-C 11636
Query 153 GGTTCTATTTTGTTGGTTTCTAGGAC--CGCCGTAATGATTAATAGGGATAGTCGGGGGT 210
||||||||||||||||||| || || || ||||||||||||||||||| |||||
Sbjct 11635 GGTTCTATTTTGTTGGTTTTCAGAACTCCGAGGTAATGATTAATAGGGATAACTGGGGGC 11576
Query 211 GTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAA 270
| ||||| || ||||||||||||||||||| ||||| ||| | |||||
Sbjct 11575 ATTCGTATTGCGACGTTAGAGGTGAAATTCTTGGATCGTCGCAAGACGAACATCAGCGAA 11516
Query 271 AGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318
||| || |||| | ||||||||| ||||| ||||||||||||| ||
Sbjct 11515 AGCATTTGCCAAAGGTGTTTTCATCAATCA-AGAACGAAAGTTAGAGG 11469
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915150624960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |