Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017 -06-23] 5,395 sequences; 248,577,651 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq318 214 3e-53 >seq318 Length=176241 Score = 214 bits (236), Expect = 3e-53 Identities = 215/282 (76%), Gaps = 37/282 (13%) Strand=Plus/Plus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 10945 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 11004 Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCA--------GCCAC 123 | |||| || | |||| |||||| |||||||||||||| ||| Sbjct 11005 C-TCAATCT-CGTGCGGCTCGAAGCCGCCGGTCCCTCTAAGAAGAATTTTAATACGCCGT 11062 Query 124 CA------------ACCATAGTCG-----------ATGGGG----CTATTTAGCAGGTTA 156 || ||| | ||| ||| | |||||||||||| || Sbjct 11063 CAGTGAGTTGAACGACCGAAATCGCTCACACCTAAATGACGACGCCTATTTAGCAGGCTA 11122 Query 157 AGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCAT 216 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| Sbjct 11123 GAGTCTCGTTCGTTACCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCAT 11182 Query 217 GCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||| |||||||||||||||||| |||||||| Sbjct 11183 GCACCACCACCCACCGAATCAAGAAAGAGCTATTAATCTGTC 11224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796758355995