Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017
-06-23] 5,395 sequences; 248,577,651 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq318 351 2e-94
seq256 239 8e-61
>seq318
Length=176241
Score = 351 bits (388), Expect = 2e-94
Identities = 248/281 (88%), Gaps = 2/281 (1%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | ||||| || | ||||| | ||||||||||||||||||||||||||||
Sbjct 4177 TACTGAGCAGTATTACTATCGCAACGACGAGCCATCAGTAGGGTAAAACTAACCTGTCTC 4236
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||||||||||||||| || ||||||||||||||||||||| ||
Sbjct 4237 ACGACGGTCTAAACCCAGCTCACGTTCCCTTTTGATGGGTGAACAATCCAACGCTTGGCG 4296
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
|||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4297 AATTTTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 4356
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 4357 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTTG-C 4415
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280
| ||| || ||||||||||||||||||| |||||
Sbjct 4416 TAAAAACTCTTTATACTAAAGGATCGATAGGCCGTGCTTTC 4456
>seq256
Length=399911
Score = 239 bits (264), Expect = 8e-61
Identities = 161/179 (90%), Gaps = 1/179 (1%)
Strand=Plus/Minus
Query 25 CGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACG 83
||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 318609 CGACGAGCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACG 318550
Query 84 TTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAA 143
|||||| || || ||||||||||||||||| ||||||| | ||||| ||||||||||
Sbjct 318549 TTCCCTTCTAACGGATGAACAATCCAACGCTTCCCGAATTTTACTTCGCAATGATAGGAA 318490
Query 144 GAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCC 202
| ||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct 318489 GTGCCGATATCGAAGGATCAAAAATCAACGTCGCTATGAACGCTTGGTCGCCACAAGCC 318431
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854353905120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |