Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017 -06-23] 5,395 sequences; 248,577,651 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq318 351 2e-94 seq256 239 8e-61 >seq318 Length=176241 Score = 351 bits (388), Expect = 2e-94 Identities = 248/281 (88%), Gaps = 2/281 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | ||||| | |||||||||||||||||||||||||||| Sbjct 4177 TACTGAGCAGTATTACTATCGCAACGACGAGCCATCAGTAGGGTAAAACTAACCTGTCTC 4236 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||| || ||||||||||||||||||||| || Sbjct 4237 ACGACGGTCTAAACCCAGCTCACGTTCCCTTTTGATGGGTGAACAATCCAACGCTTGGCG 4296 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4297 AATTTTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 4356 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 4357 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTTG-C 4415 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTC 280 | ||| || ||||||||||||||||||| ||||| Sbjct 4416 TAAAAACTCTTTATACTAAAGGATCGATAGGCCGTGCTTTC 4456 >seq256 Length=399911 Score = 239 bits (264), Expect = 8e-61 Identities = 161/179 (90%), Gaps = 1/179 (1%) Strand=Plus/Minus Query 25 CGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACG 83 ||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 318609 CGACGAGCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACG 318550 Query 84 TTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAA 143 |||||| || || ||||||||||||||||| ||||||| | ||||| |||||||||| Sbjct 318549 TTCCCTTCTAACGGATGAACAATCCAACGCTTCCCGAATTTTACTTCGCAATGATAGGAA 318490 Query 144 GAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCC 202 | ||||| |||||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct 318489 GTGCCGATATCGAAGGATCAAAAATCAACGTCGCTATGAACGCTTGGTCGCCACAAGCC 318431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854353905120