Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Danaus_20plexippus_20plexippus_20[genbank_20GCA_5F000235995.2_202017 -06-23] 5,395 sequences; 248,577,651 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq318 102 8e-20 >seq318 Length=176241 Score = 102 bits (112), Expect = 8e-20 Identities = 136/185 (74%), Gaps = 13/185 (7%) Strand=Plus/Minus Query 12 TTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC------CTTTGCTCGAATACATTA 65 |||||||||||| ||||||||| | ||||||| ||| | ||| |||| ||| Sbjct 11721 TTTTACTTTGAACAAATTAGAGTGCTCAAAGCGGGCTCAAAACGCCGCTTGAAT--ATTT 11664 Query 66 C---CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGAC-CGCC 121 | ||||||||||||||||| || | |||||||||||||| ||||| || || | Sbjct 11663 CGTGCATGGAATAATAGAATATGATCT-CGGTTCTATTTTGTTGGTTTTCAGAACTCCGA 11605 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 |||||||| |||| ||||| ||||| | ||||| || | |||||||||||| Sbjct 11604 GGTAATGATTAATAGGGATAACTGGGGGCATTCGTATTGCGACGTTAGAGGTGAAATTCT 11545 Query 182 TGGAT 186 ||||| Sbjct 11544 TGGAT 11540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511973240800