Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= AAMG01000056.1 Length=332 Score E Sequences producing significant alignments: (Bits) Value seq20659 75.2 2e-11 >seq20659 Length=1327 Score = 75.2 bits (82), Expect = 2e-11 Identities = 145/210 (69%), Gaps = 7/210 (3%) Strand=Plus/Plus Query 125 ACGTCTACACTCTTTAACCGGCTATTCCGTCAGCCGGCGGCGTTGTCACTCCTGCGTCCC 184 ||| |||||| ||| |||| ||||||| ||| ||| | | | | || || |||||| Sbjct 905 ACGACTACACGCTTGAACCAACTATTCCAACAGTTGGCTGAGCTAAC-CTTCTCCGTCCC 963 Query 185 CACGTCACCCTCAAATGTA--GTAACGGAATACTAACCGTTTCTGCCATCGGTCTCGCCG 242 ||| || | || | || ||| |||||| || | ||||| ||||| | ||| Sbjct 964 CACATCGCACT--ATTGATCGGTACAGGAATATTACCTGTTTC--CCATCAGCTACGCAT 1019 Query 243 TTCGGCTGAACCTTATGACCCGACTTACCCTGATCCGATTAGCGGTGATCAGGAAACCTT 302 || || ||||| | |||||| ||||| ||||| | || || |||||||||| Sbjct 1020 CTCTGCCTCGCCTTAGGGGCCGACTCACCCTACGCCGATGAACGTTGCGTAGGAAACCTT 1079 Query 303 AGTCTTTCGGCGAGGGGGTTTCCCACCCCC 332 ||||||||||||||| || ||||||| Sbjct 1080 GCGCTTTCGGCGAGGGGGCTTTTCACCCCC 1109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 959723510400