Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= AAMG01000150.1 Length=138 Score E Sequences producing significant alignments: (Bits) Value seq12137 84.2 2e-14 >seq12137 Length=333 Score = 84.2 bits (92), Expect = 2e-14 Identities = 97/127 (76%), Gaps = 4/127 (3%) Strand=Plus/Minus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTC-ATGAATCACAAAGTGGTAAGCGCC 73 |||||||| ||||||||| |||||||||||||||| |||| | || ||||| | | Sbjct 299 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCGCTGAA-CCCACCGTGGTCGCCTGC 241 Query 74 CTCCC--GAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCG 131 ||||| | ||||| | | |||| || | || ||||||||||||||||||||| Sbjct 240 CTCCCTTGCGGGTTAGCGCAGCGCCTTCGGGTGAATCCAACTCCCATGGTGTGACGGGCG 181 Query 132 GTGTGTA 138 ||||||| Sbjct 180 GTGTGTA 174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345506684760