Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq14664 93.3 4e-17 >seq14664 Length=674 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/108 (81%), Gaps = 2/108 (2%) Strand=Plus/Plus Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67 ||||||||||| ||| | |||||| ||| ||||||||| |||||| ||||| |||| Sbjct 333 GGTGGATGCCTTGGCAATGATAGGCGACGAAAGACGTGATAGCCTGCGATAAGCTTCGGG 392 Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCC 114 || ||||| ||| | |||||||| |||| ||||||||||| ||||| Sbjct 393 GAGCTGGCAAATA-GCTTTGATCCGGAGATTTCCGAATGGGGAAACCC 439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476666968181