Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq20659 394 2e-107 >seq20659 Length=1327 Score = 394 bits (436), Expect = 2e-107 Identities = 341/418 (82%), Gaps = 16/418 (4%) Strand=Plus/Plus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| | | |||||| ||||| ||||||| ||| ||||||||| || |||||||| Sbjct 360 CGCGGGGAGATTGCATCATCACAAACATTTCAACTTCGCTGAGTCTCTGGAGGAGACAGT 419 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 420 GTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 479 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| |||||||||||||||||| ||| |||| |||||||||| || Sbjct 480 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGACTTCAGTCAAGAGCTT-GC---- 534 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 ||||||||| |||| ||||| |||||||||||||||||||||||||||||| |||| Sbjct 535 ----ACCCCATCATTTAATCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCGACTT 590 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 ||||||||||||||||||||||||||| |||||||||||||| || | | | | ||| Sbjct 591 TCGTGTTTGCAGAGTGCTGTGTTTTTATTAAACAGTCGCAGCCACCGATTTTTTGCAACC 650 Query 301 GGCATGAGCT--TACGGAGCAAGTCCTTCACCCTC-ACCGGCGCACCTTCTCCCGAAGTT 357 || ||| | | | || |||||| | ||| ||||||| |||||||| Sbjct 651 CCGTTGGGCTCCCTCTGTTCGAG---TTCACCTACTTGGGGCATACCTTCT-CCGAAGTT 706 Query 358 ACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTC 415 |||||| | |||||| ||||||||| || ||||||||||||||||||| | || ||| Sbjct 707 ACGGTGTCAATTTGCCGAGTTCCTTCTCCAGAGTTCTCTCAAGCGCCTTAGAATACTC 764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260436876992