Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq20659 228 2e-57 >seq20659 Length=1327 Score = 228 bits (252), Expect = 2e-57 Identities = 212/267 (79%), Gaps = 9/267 (3%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 ||||| |||| ||| ||| ||| | |||||| | | ||||||||| |||||| Sbjct 372 GCATCATCACAAACATTTCAACTTCGCTGAGTCTCTGGAGGAGACAGTGTGGCCATCGTT 431 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 432 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 491 Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC 186 |||||||||||||||||||||||| ||| ||| | || |||| | | || | Sbjct 492 TAGTTACGGCCGCCGTTTACTGGGACTTCAGTCAAGAGC-----TTGC---ACCCCAT-C 542 Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246 |||| ||||||||||||||||||||||| ||||||| ||| ||| || || |||| Sbjct 543 ATTTAATCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCGACTTTCGTGTTTGCAG 602 Query 247 AAACCTGTGTTTTTGGTAAACAGTCGC 273 | |||||||||| ||||||||||| Sbjct 603 AGTGCTGTGTTTTTATTAAACAGTCGC 629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062094018176