Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq12137 136 1e-29 >seq12137 Length=333 Score = 136 bits (150), Expect = 1e-29 Identities = 129/165 (78%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 331 GGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAA 390 ||||||||||||||||||||||| ||| || || | |||| ||| | Sbjct 1 GGGCTACACACGTGCTACAATGGCGGTGACAGTAGGACGCAATGGGGCGACCCGGAGCCA 60 Query 391 ATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGA 450 |||| |||| ||||||||||||||||| |||||||||||| | ||||||||||| Sbjct 61 ATCCACTAAAAGCCGTCTCAGTTCGGATTGTACTCTGCAACTCGAGTGCATGAAGCTGGA 120 Query 451 ATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTTCCC 495 |||||||||||||| ||||||||||| |||||||||||||||| Sbjct 121 ATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATACGTTCCC 165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503566832960