Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq12279 179 6e-43 >seq12279 Length=963 Score = 179 bits (198), Expect = 6e-43 Identities = 110/117 (94%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||||||| || |||||||||||||||||||||||||||||||||| |||||||| Sbjct 530 CTATTTAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 471 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct 470 ACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTCTCAATCTGTC 414 Score = 116 bits (128), Expect = 6e-24 Identities = 91/105 (87%), Gaps = 4/105 (4%) Strand=Plus/Minus Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71 ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 922 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 863 Query 72 CCTCAAACT-TCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||| ||| || ||||||| ||| | |||||||||||||| Sbjct 862 -CTC--ACTGTCACGCGGCTGGACGCCGCTTGTCCCTCTAAGAAG 821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796577685081