Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1685 345 7e-93 >seq1685 Length=22392 Score = 345 bits (382), Expect = 7e-93 Identities = 237/266 (89%), Gaps = 1/266 (0%) Strand=Plus/Plus Query 29 GGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCC 88 |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 718 GGTCGTCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCC 777 Query 89 TATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCC 148 | | ||||||||||||||| |||||| ||||| |||||||| ||||||||||||||| Sbjct 778 TGTAGGTGGGTGAACAATCCTACGCTTGGCGAATACTGCTTCGCAATGATAGGAAGAGCC 837 Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 208 ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct 838 GACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTAT 897 Query 209 CCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG-AGGGACTAAAGGATCGAT 267 ||||||||||||||||||| ||||||| || ||||| | | | || | ||||||||||| Sbjct 898 CCCTGTGGTAACTTTTCTGACACCTCTTGCTTCAAACTCAGAATGGCCAAAAGGATCGAT 957 Query 268 AGGCCACACTTTCATGGTTTGTATTC 293 ||||| | ||||| ||| |||||| Sbjct 958 AGGCCGCGCTTTCGCGGTCCGTATTC 983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854153924256