Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq20659 147 4e-33 seq14232 118 2e-24 >seq20659 Length=1327 Score = 147 bits (162), Expect = 4e-33 Identities = 197/268 (74%), Gaps = 7/268 (3%) Strand=Plus/Minus Query 30 ACGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGAT-TTCTAAC 88 |||| ||| ||| |||||| |||| |||| |||| || ||| || || ||||||| Sbjct 266 ACGCTAGTTCTCATGGAGCCAACGTTGAAATACCACCC-TGGTGTGTTTGAGGTTCTAAC 208 Query 89 C--GGACGACGTATAACCGTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGT 146 | || | | ||| ||| |||||||||| | ||||||||||||||||||||| Sbjct 207 CTTGGTCC-CTTATCGGGATTG--GGGACAGTGTATGGTGGGCAGTTTGACTGGGGCGGT 151 Query 147 CGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGC 206 | |||||||||| |||||||||| | | ||| ||| || | || ||||| | || Sbjct 150 CTCCTCCCAAAGTGTAACGGAGGAGTTCGAAGGTACGCTAAATACGGTCGGAAATCGTGT 91 Query 207 GCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAA 266 | |||||| |||| ||| ||| |||||||||| || |||||| |||||| ||||| Sbjct 90 TGATAGTGCATTGGCATAAGCGTGCTTGACTGCGAGACTGACAAGTCGAGCAGGTACGAA 31 Query 267 AGTCGGGCTTAATGATCCGGCGGTGCTG 294 ||| || | || |||||||| ||| ||| Sbjct 30 AGTAGGACATAGTGATCCGGTGGTTCTG 3 >seq14232 Length=290 Score = 118 bits (130), Expect = 2e-24 Identities = 128/167 (77%), Gaps = 2/167 (1%) Strand=Plus/Minus Query 125 CGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCC 184 |||| |||||||||||||||||||||||||||| ||||||||||||| | | | | | Sbjct 172 CGGGTAGTTTGACTGGGGCGGTCGCCTCCCAAATGGTAACGGAGGCGCGCGATGGTGGGC 113 Query 185 TCAGCTTGGATGGAAACCATGCGCAC-AGTGCAAAGGCAAAAGGGTGTTTGACTGCGACA 243 ||| ||| ||| | || || || ||||||| |||| ||| | |||||| || | Sbjct 112 TCAAGCTGGTCGGACATCA-GCTGACGAGTGCAATGGCATAAGCCCGCCTGACTGTGAGA 54 Query 244 CCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290 | |||||| ||||| |||||||||||| | || |||||||| ||| Sbjct 53 CTGACAAGTCGAGCAGAGACGAAAGTCGGCCATAGTGATCCGGTGGT 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982117058976