Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq18981 82.4 5e-14 seq12278 82.4 5e-14 >seq18981 Length=1491 Score = 82.4 bits (90), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 3/74 (4%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 579 TCCGAAGGC-CTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 523 Query 99 GGCAGGGACGTAAT 112 |||||||||||||| Sbjct 522 GGCAGGGACGTAAT 509 >seq12278 Length=636 Score = 82.4 bits (90), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 3/74 (4%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| |||| || ||||||||| ||||||||||| |||||||||| Sbjct 474 TCCGAAGGC-CTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 530 Query 99 GGCAGGGACGTAAT 112 |||||||||||||| Sbjct 531 GGCAGGGACGTAAT 544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300718781180