Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq20659 152 5e-35 seq14232 98.7 9e-19 >seq20659 Length=1327 Score = 152 bits (168), Expect = 5e-35 Identities = 114/134 (85%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 46 CAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGAGCCGTCACTCTCGCAGT 105 ||||||||||||||||||||| ||| |||||| |||||||||| |||| ||||||||| Sbjct 3 CAGAACCACCGGATCACTATGTCCTACTTTCGTACCTGCTCGACTTGTCAGTCTCGCAGT 62 Query 106 CAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTCCGACCGTGATTAGCTGACCTTC 165 ||||| |||||||||| ||||||| | |||||| ||||||||| ||||| |||||| Sbjct 63 CAAGCACGCTTATGCCAATGCACTATCAACACGATTTCCGACCGTATTTAGCGTACCTTC 122 Query 166 GTGCTCCTCCGTTA 179 | ||||||||||| Sbjct 123 GAACTCCTCCGTTA 136 >seq14232 Length=290 Score = 98.7 bits (108), Expect = 9e-19 Identities = 102/132 (77%), Gaps = 4/132 (3%) Strand=Plus/Plus Query 50 ACCACCGGATCACTATGACCTGCTTTCGCACCTGCTCGAGCCGTCACTCTCGCAGTCAAG 109 ||||||||||||||||| || |||||| |||||||| |||| |||| |||||| | Sbjct 7 ACCACCGGATCACTATGGCCGACTTTCGTCTCTGCTCGACTTGTCAGTCTCACAGTCAGG 66 Query 110 CCAGCTTATGCCATTGCACTAACCTCA--CGATGTCCGACCGTGATTAGCTGACCTTCGT 167 | ||||||||||||||||| | ||| ||||||||||| | ||| ||| ||| Sbjct 67 CGGGCTTATGCCATTGCACT--CGTCAGCTGATGTCCGACCAGCTTGAGCCCACCATCGC 124 Query 168 GCTCCTCCGTTA 179 || ||||||||| Sbjct 125 GCGCCTCCGTTA 136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473467861012