Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq24035 149 2e-33 >seq24035 Length=260 Score = 149 bits (164), Expect = 2e-33 Identities = 105/119 (88%), Gaps = 1/119 (1%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| ||| ||||||| ||| || ||| |||||||||||||| |||||||| |||| Sbjct 140 CGAGTCTGAATAGGGCGATGAGTTGCAGGGATTAGACCCGAAACCAGGTGATCTATCCAT 199 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119 ||||||||||||||||||||||||||| ||||||||||||||| |||| ||||| |||| Sbjct 200 GGCCAGGATGAAGGTGCGGTAACACGCACTGGAGGTCCGAACCGACTAGTGTTGCAAAA 258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689113378304