Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq14664 235 1e-59 >seq14664 Length=674 Score = 235 bits (260), Expect = 1e-59 Identities = 247/321 (77%), Gaps = 4/321 (1%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| |||||||||||||||| || | |||||| ||| ||||| |||| ||||||| Sbjct 324 AGAGCATGTGGTGGATGCCTTGGCAATGATAGGCGACGAAAGACGTGATAGCCTGCGATA 383 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| ||||||| ||||| | |||||||||| |||||||||||||||||||||| | Sbjct 384 AGCTTCGGGGAGCTGGCAAATAG-CTTTGATCCGGAGATTTCCGAATGGGGAAACCCACC 442 Query 121 CCTTT--GGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAA 178 || |||| | | | |||||||||||||| |||||| || |||||||| Sbjct 443 CCGCGAGGGGTAACT-CTGACTGAATACATAGGTCATTGTGGCGAACCGGGTGAACTGAA 501 Query 179 ACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 |||||| ||||||| ||||||||| ||||||||||||||| ||||||| |||||||||| Sbjct 502 ACATCTCAGTAGCTCGAGGAAAAGACATCAACCGAGATTCCGAAAGTAGCGGCGAGCGAA 561 Query 239 ATGGGATGAGCCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCC 298 || ||| |||||||||| ||| | ||| ||| |||||| ||| Sbjct 562 ATTGGAGTAGCCTTTACGTTTTAGCATCGTGTATATCAGAACGGAATGGAAAGTCCGGCC 621 Query 299 ATAGCGGGTGATAGCCCCGTA 319 ||||||||||||||||||||| Sbjct 622 ATAGCGGGTGATAGCCCCGTA 642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918135491616