Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20magna_20[genbank_20GCA_5F001632505.1_202016-04-26] 28,801 sequences; 129,543,483 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1685 419 7e-115 >seq1685 Length=22392 Score = 419 bits (464), Expect = 7e-115 Identities = 427/557 (77%), Gaps = 56/557 (10%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||| || | || | ||||| || ||||| ||||| | ||||||||| Sbjct 7949 GTACTCATTCCAATCACGGGGCCTCGGAAGAGTCCCGTATCGTTATTTTTCGTCACTACC 8008 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8009 TCCCCGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 8068 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 8069 TTCTCAGGCTCCCTCTCCGGAATCGAACCCCGATTCCCCGTTACCCGTAGCAACCATGGT 8128 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| || ||||||||||| |||||||| |||||| ||||||| || | |||||||| Sbjct 8129 AGGCGCGTAACCTACCATCGACAGTTGATAAGGCAGACATTTGAAAGATACGTCGCCGGC 8188 Query 240 TC-AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA----------GGAGCCC 286 || ||||||||||||| ||| ||||||| || ||||||| || | Sbjct 8189 TCGAAGGCCATGCGATCGGCGTGAAGTTATCCAGAGTCACCAAAATTGGTACGGGTCGCG 8248 Query 287 CGAAGG----------------GCGTTGGTTTTTTATCTAATAAATACACCCCTTC---- 326 ||| || || | |||| |||||||||| |||| |||| Sbjct 8249 CGACGGTTGCCCGCCGCTCGCCCCGACTGGTTTTGATCTAATAAAAGCACCTCTTCTGCA 8308 Query 327 ----------------CGAAGTCG-GGGTTTTTAGCATGTATTAGCTCTAGAATTACCAC 369 || ||||| || | |||||||||||||||||||||||||| Sbjct 8309 CCCACCGCGAAGCGGGCGCAGTCGAGGCTCGAGTGCATGTATTAGCTCTAGAATTACCAC 8368 Query 370 GGTTATCCATGTAGTAAGGTACT--ATCAAATAAACGATAACTGATTTAATGAGCCATTC 427 |||||||| |||| | || | | ||| || ||| |||||||||||| |||||||||| Sbjct 8369 AGTTATCCAAGTAGGATGG-AGTGGATCTAAGGAACCATAACTGATTTATTGAGCCATTC 8427 Query 428 GCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAG 487 || ||||| | || ||| |||| ||||||||||||||||||||||||||||||||||| Sbjct 8428 GCGGTTTCGCCGTCTAG-CGGCTTGTACTTAGACATGCATGGCTTAATCTTTGAGACAAG 8486 Query 488 CATATGACTACTGGCAG 504 |||||| |||||||||| Sbjct 8487 CATATG-CTACTGGCAG 8502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509964989696