Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20pulex_20[genbank_20GCA_5F000187875.1_202011-02-04] 5,186 sequences; 197,206,209 total letters Query= AAMG01000056.1 Length=332 Score E Sequences producing significant alignments: (Bits) Value seq436 73.4 8e-11 >seq436 Length=167649 Score = 73.4 bits (80), Expect = 8e-11 Identities = 156/229 (68%), Gaps = 7/229 (3%) Strand=Plus/Minus Query 105 GGATTTGCCTGCGGAAATCAACGTCTACACTCTTTAACCGGCTATTCCGTCAGCCGGCGG 164 |||||||||| || | ||| |||||| ||| |||||| ||| || ||||| | Sbjct 96950 GGATTTGCCTAAGGGAT---ACGACTACACGCTTGAACCGGGACATCCAACACCCGGCTG 96894 Query 165 CGTTGTCACTCCTGCGTCCCCACGTCACCCTCAAATGTAGTAACGGAATACTAACC-GTT 223 | | | || || ||||||||| || | || | | ||| |||||| | ||| ||| Sbjct 96893 AGCTAAC-CTTCTCCGTCCCCACATCGCACTTACAATCGGTACAGGAATATTTACCTGTT 96835 Query 224 TCTGCCATCGGTCTCGCCGTTCGGCTGAACCTTATGACCCGACTTACCCTGATCCGATTA 283 || ||||| | ||| || || ||||| | |||||| ||||| ||||| | Sbjct 96834 TC--CCATCAGCTACGCATCTCTGCCTCGCCTTAGGGGCCGACTCACCCTACGCCGATGA 96777 Query 284 GCGGTGATCAGGAAACCTTAGTCTTTCGGCGAGGGGGTTTCCCACCCCC 332 || || || ||||||| ||||||||||||||| || ||||||| Sbjct 96776 ACGTTGCGTAGAAAACCTTGCGCTTTCGGCGAGGGGGCTTTTCACCCCC 96728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 959950214400