Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20pulex_20[genbank_20GCA_5F000187875.1_202011-02-04] 5,186 sequences; 197,206,209 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq436 192 1e-46 >seq436 Length=167649 Score = 192 bits (212), Expect = 1e-46 Identities = 239/325 (74%), Gaps = 7/325 (2%) Strand=Plus/Plus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||||||| |||||| ||| | || ||||| | || ||||| || | ||| Sbjct 99816 AGGGGAGTGAAATAGATCCTGAAACCGTGTGCATACAAACAGTAGGAGCGGACTTGTTCC 99875 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 ||||| |||| ||||||| |||||| | | ||| ||| ||| || ||||||| Sbjct 99876 GTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTACAT-TCAGTGGCAAGGTTAACC 99934 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG-AGTTGGTGGCG 189 || | || ||||| || |||| |||| | || ||||||| ||| | ||| Sbjct 99935 GCATAGGGA-----AGCCGTAGAGAAATCGAGTCCGAATAGGGCGAATCAGTCGCTGGGT 99989 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 ||||| ||||||| ||||||||| || | |||||||||| |||||||| || || Sbjct 99990 GTAGACCCGAAACCAAGTGATCTACTCATGGCCAGGTTGAAGGTGCGGTAACACGCACTG 100049 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 |||||||||||| || |||||||| || |||||| | |||||||||||||||| Sbjct 100050 GAGGACCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGG 100109 Query 310 CCAATCAAACTGGGAAATAGCTCGT 334 | || |||||| |||||||||| || Sbjct 100110 CTAAACAAACTTGGAAATAGCTGGT 100134 Score = 154 bits (170), Expect = 3e-35 Identities = 231/325 (71%), Gaps = 10/325 (3%) Strand=Plus/Plus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||||||| |||||| ||| || ||||| || |||||| | | Sbjct 95949 AGGGGAGTGAAATAGATCCTGAAACCGTATGCATACAAAAAGTAGGAGCCC---GCAAGG 96005 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 ||||| |||| ||||||| |||||| | | ||| ||| ||| |||||||||| Sbjct 96006 GTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTACAT-TCAGTGGCGAGGTTAACC 96064 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG-AGTTGGTGGCG 189 | | || ||||| || |||| |||| | || ||||||| ||| | ||| Sbjct 96065 GAATAGGGA-----AGCCGTAGAGAAATCGAGTCCGAATAGGGCGAATTAGTCGCTGGGT 96119 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 ||||| ||||||| |||||||| ||| | |||| ||||| | ||||| ||| || Sbjct 96120 GTAGACCCGAAACCAAGTGATCTATCCATGGCCAGGATGAAGGTACCGTAACAGGTGCTG 96179 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 |||| |||||||| || |||| ||| || ||||||| | || ||||||||||||| Sbjct 96180 GAGGTCCGAACCGACTAATGTTGCAAAATTAGCGGATGAGCTGTGGATAGGGGTGAAAGG 96239 Query 310 CCAATCAAACTGGGAAATAGCTCGT 334 | || |||||| |||||||||| || Sbjct 96240 CTAAACAAACTTGGAAATAGCTGGT 96264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972749550592