Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20pulex_20[genbank_20GCA_5F000187875.1_202011-02-04] 5,186 sequences; 197,206,209 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq436 89.7 5e-16 >seq436 Length=167649 Score = 89.7 bits (98), Expect = 5e-16 Identities = 129/178 (72%), Gaps = 8/178 (4%) Strand=Plus/Minus Query 5 CTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAGATA 64 ||||||||||| ||||||| |||||||| || |||| ||||||||| | | ||| Sbjct 97037 CTGAAGCTTAGTGGCTTTTCCTGGAAGCAGGGTATCACTCACTTCGTCTGCAAGCAGA-- 96980 Query 65 ACTCGTCATCAGCTCCCGGCCTTAGAATCCCGGATTTACCTAAG--ATTCCAGCCTACCA 122 ||||| |||| | || || | ||||||||| |||||| || | | |||| Sbjct 96979 -CTCGTTATCA-CGCCTCATCTAATTCCCCCGGATTTGCCTAAGGGATACGA--CTACAC 96924 Query 123 CCTTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCA 180 ||| ||| ||||| ||||| || |||| ||| ||||||||||||| ||||||| Sbjct 96923 GCTTGAACCGGGACATCCAACACCCGGCTGAGCTAACCTTCTCCGTCCCCACATCGCA 96866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518373955908