Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20pulex_20[genbank_20GCA_5F000187875.1_202011-02-04] 5,186 sequences; 197,206,209 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq436 102 8e-20 >seq436 Length=167649 Score = 102 bits (112), Expect = 8e-20 Identities = 140/189 (74%), Gaps = 14/189 (7%) Strand=Plus/Plus Query 2 GCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGC 61 ||| | ||||||||||| ||| | |||||| ||||||||| || ||||| |||| Sbjct 99346 GCACATGGTGGATGCCTTGGCGATATCAGGCGATGAAGGACGTAGTAGCTTGCGATAAGC 99405 Query 62 TACGGGGATTG-GCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCG---AT 117 | |||||| || ||| | || ||||||||| |||| ||||||||||| |||||| | Sbjct 99406 TGCGGGGAGTGAGCAAACACACATTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCGT 99465 Query 118 A----TATTGGAGA-TATAT-CATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAAC 171 | |||| | | | || |||| | || || | |||||||||| |||||||||| Sbjct 99466 AAGGTCATTGCATACTGAATACATA--GGTATGC--AAAGCGAACGTGGCGAACTGAAAC 99521 Query 172 ATCTAAGTA 180 ||||||||| Sbjct 99522 ATCTAAGTA 99530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476776045866