Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20pulex_20[genbank_20GCA_5F000187875.1_202011-02-04] 5,186 sequences; 197,206,209 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq436 131 2e-28 >seq436 Length=167649 Score = 131 bits (144), Expect = 2e-28 Identities = 181/249 (73%), Gaps = 11/249 (4%) Strand=Plus/Minus Query 7 CTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCT 66 |||||| |||||||||||||||| || ||||| || |||| | || || ||| | || Sbjct 101164 CTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC-GTGTTTGCAGAGTGCT 101106 Query 67 GTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCAC------CACCAGCTCA 120 ||||||||| ||||||||||| || | ||| | ||| ||| | | || ||| Sbjct 101105 GTGTTTTTATTAAACAGTCGCAGCCACCGATTTTTTGCAACCCCGTTGGGCTCC--CTCT 101048 Query 121 ACACGTCGTTCACCAGCA-GTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGA 179 ||| ||||||| | | |||| ||||||||||||||||||| || |||||||| Sbjct 101047 GTACGA-GTTCACCTACTTGGGGCATACCTTCTCCCGAAGTTACGGTATCAATTTGCCGA 100989 Query 180 ATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGG 239 |||||| || ||||| | | | |||||||| || ||| | | |||| ||||||| Sbjct 100988 GTTCCTTCTCCTGAGTTCTCTCAAGCGCCTTAGAATACTCATCTCGCGCACCAGTGTCGG 100929 Query 240 TTTACGGTA 248 ||| ||||| Sbjct 100928 TTTGCGGTA 100920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694365113778