Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20pulex_20[genbank_20GCA_5F000187875.1_202011-02-04] 5,186 sequences; 197,206,209 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq746 352 5e-95 seq3490 347 2e-93 seq3088 345 7e-93 seq2913 345 7e-93 seq1259 345 7e-93 seq2650 342 9e-92 seq816 342 9e-92 seq340 342 9e-92 seq3135 318 1e-84 seq1785 176 8e-42 seq2660 129 1e-27 seq436 75.2 2e-11 >seq746 Length=14047 Score = 352 bits (390), Expect = 5e-95 Identities = 245/275 (89%), Gaps = 6/275 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | ||||| |||||||||||||||||||||||||||||| Sbjct 5802 TACTGAGCAGGATTACTATCGCAACGACGAGTCATCAGTAGGGTAAAACTAACCTGTCTC 5861 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||||||||||||||||||||||||| | ||||||||||||| |||||| || Sbjct 5862 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGCGGGTGAACAATCCGACGCTTGGCG 5921 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5922 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 5981 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| | Sbjct 5982 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAATTTTTCTGACACCTCTTTCT 6041 Query 240 TCAAATTTCGAGGGACTAA--AGGATCGATAGGCC 272 ||||| | ||| | ||| |||||||||||||| Sbjct 6042 TCAAACTCCGA---AATAAAGAGGATCGATAGGCC 6073 >seq3490 Length=1592 Score = 347 bits (384), Expect = 2e-93 Identities = 238/267 (89%), Gaps = 1/267 (0%) Strand=Plus/Minus Query 28 CGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCC 87 ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 893 CGGTCGTCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCC 834 Query 88 CTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGC 147 || | ||||||||||||||| |||||| ||||| |||||||| |||||||||||||| Sbjct 833 CTGTAGGTGGGTGAACAATCCTACGCTTGGCGAATACTGCTTCGCAATGATAGGAAGAGC 774 Query 148 CGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTA 207 |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct 773 CGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTA 714 Query 208 TCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG-AGGGACTAAAGGATCGA 266 |||||||||||||||||||| ||||||| || ||||| | | | || | |||||||||| Sbjct 713 TCCCTGTGGTAACTTTTCTGACACCTCTTGCTTCAAACTCAGAATGGCCAAAAGGATCGA 654 Query 267 TAGGCCACACTTTCATGGTTTGTATTC 293 |||||| | ||||| ||| |||||| Sbjct 653 TAGGCCGCGCTTTCGCGGTCCGTATTC 627 >seq3088 Length=34848 Score = 345 bits (382), Expect = 7e-93 Identities = 237/266 (89%), Gaps = 1/266 (0%) Strand=Plus/Plus Query 29 GGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCC 88 |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 273 GGTCGTCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCC 332 Query 89 TATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCC 148 | | ||||||||||||||| |||||| ||||| |||||||| ||||||||||||||| Sbjct 333 TGTAGGTGGGTGAACAATCCTACGCTTGGCGAATACTGCTTCGCAATGATAGGAAGAGCC 392 Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 208 ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct 393 GACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTAT 452 Query 209 CCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG-AGGGACTAAAGGATCGAT 267 ||||||||||||||||||| ||||||| || ||||| | | | || | ||||||||||| Sbjct 453 CCCTGTGGTAACTTTTCTGACACCTCTTGCTTCAAACTCAGAATGGCCAAAAGGATCGAT 512 Query 268 AGGCCACACTTTCATGGTTTGTATTC 293 ||||| | ||||| ||| |||||| Sbjct 513 AGGCCGCGCTTTCGCGGTCCGTATTC 538 >seq2913 Length=3442 Score = 345 bits (382), Expect = 7e-93 Identities = 237/266 (89%), Gaps = 1/266 (0%) Strand=Plus/Plus Query 29 GGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCC 88 |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 2974 GGTCGTCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCC 3033 Query 89 TATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCC 148 | | ||||||||||||||| |||||| ||||| |||||||| ||||||||||||||| Sbjct 3034 TGTAGGTGGGTGAACAATCCTACGCTTGGCGAATACTGCTTCGCAATGATAGGAAGAGCC 3093 Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 208 ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct 3094 GACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTAT 3153 Query 209 CCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG-AGGGACTAAAGGATCGAT 267 ||||||||||||||||||| ||||||| || ||||| | | | || | ||||||||||| Sbjct 3154 CCCTGTGGTAACTTTTCTGACACCTCTTGCTTCAAACTCAGAATGGCCAAAAGGATCGAT 3213 Query 268 AGGCCACACTTTCATGGTTTGTATTC 293 ||||| | ||||| ||| |||||| Sbjct 3214 AGGCCGCGCTTTCGCGGTCCGTATTC 3239 >seq1259 Length=9117 Score = 345 bits (382), Expect = 7e-93 Identities = 237/266 (89%), Gaps = 1/266 (0%) Strand=Plus/Plus Query 29 GGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCC 88 |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 6784 GGTCGTCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCC 6843 Query 89 TATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCC 148 | | ||||||||||||||| |||||| ||||| |||||||| ||||||||||||||| Sbjct 6844 TGTAGGTGGGTGAACAATCCTACGCTTGGCGAATACTGCTTCGCAATGATAGGAAGAGCC 6903 Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 208 ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct 6904 GACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTAT 6963 Query 209 CCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG-AGGGACTAAAGGATCGAT 267 ||||||||||||||||||| ||||||| || ||||| | | | || | ||||||||||| Sbjct 6964 CCCTGTGGTAACTTTTCTGACACCTCTTGCTTCAAACTCAGAATGGCCAAAAGGATCGAT 7023 Query 268 AGGCCACACTTTCATGGTTTGTATTC 293 ||||| | ||||| ||| |||||| Sbjct 7024 AGGCCGCGCTTTCGCGGTCCGTATTC 7049 >seq2650 Length=3322 Score = 342 bits (378), Expect = 9e-92 Identities = 236/266 (89%), Gaps = 1/266 (0%) Strand=Plus/Minus Query 29 GGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCC 88 |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1085 GGTCGTCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCC 1026 Query 89 TATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCC 148 | | ||||||||||||||| |||||| ||||| |||||||| ||||||||||||||| Sbjct 1025 TGTAGGTGGGTGAACAATCCTACGCTTGGCGAATACTGCTTCGCAATGATAGGAAGAGCC 966 Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 208 ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct 965 GACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTAT 906 Query 209 CCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG-AGGGACTAAAGGATCGAT 267 ||||||||||||||||||| ||||||| || ||||| | | | || | ||||||||||| Sbjct 905 CCCTGTGGTAACTTTTCTGACACCTCTTGCTTCAAACTCAGAATGGCCAAAAGGATCGAT 846 Query 268 AGGCCACACTTTCATGGTTTGTATTC 293 || || | ||||| ||| |||||| Sbjct 845 AGNCCGCGCTTTCGCGGTCCGTATTC 820 >seq816 Length=34228 Score = 342 bits (378), Expect = 9e-92 Identities = 236/266 (89%), Gaps = 1/266 (0%) Strand=Plus/Minus Query 29 GGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCC 88 |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 6467 GGTCGTCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCC 6408 Query 89 TATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCC 148 | | ||||||||||||||| |||||| ||||| |||||||| ||||||||||||||| Sbjct 6407 TGTAGGTGGGTGAACAATCCTACGCTTGGCGAATACTGCTTCGCAATGATAGGAAGAGCC 6348 Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 208 ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct 6347 GACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTAT 6288 Query 209 CCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG-AGGGACTAAAGGATCGAT 267 ||||||||||||||||||| ||||||| || ||| | | | | || | ||||||||||| Sbjct 6287 CCCTGTGGTAACTTTTCTGACACCTCTTGCTTCANACTCAGAATGGCCAAAAGGATCGAT 6228 Query 268 AGGCCACACTTTCATGGTTTGTATTC 293 ||||| | ||||| ||| |||||| Sbjct 6227 AGGCCGCGCTTTCGCGGTCCGTATTC 6202 Score = 279 bits (308), Expect = 9e-73 Identities = 197/224 (88%), Gaps = 1/224 (0%) Strand=Plus/Minus Query 71 AACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC 130 ||||||||||||||||||| | ||||||||||||||| |||||| ||||| ||||||| Sbjct 34228 AACCCAGCTCACGTTCCCTGTAGGTGGGTGAACAATCCTACGCTTGGCGAATACTGCTTC 34169 Query 131 GGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGG 190 | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 34168 GCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGG 34109 Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG- 249 | ||||||||||||||||||||||||||||||||||| ||||||| || ||||| | | Sbjct 34108 CCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCTTCAAACTCAGA 34049 Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | || | |||||||||||||||| | ||||| ||| |||||| Sbjct 34048 ATGGCCAAAAGGATCGATAGGCCGCGCTTTCGCGGTCCGTATTC 34005 >seq340 Length=58022 Score = 342 bits (378), Expect = 9e-92 Identities = 236/266 (89%), Gaps = 1/266 (0%) Strand=Plus/Plus Query 29 GGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCC 88 |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1506 GGTCGTCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCC 1565 Query 89 TATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCC 148 | | ||||||||||||||| |||||| ||||| |||||||| ||||||||||||||| Sbjct 1566 TGTAGGTGGGTGAACAATCCTACGCTTGGCGAATACTGCTTCGCAATGATAGGAAGAGCC 1625 Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 208 |||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct 1626 GACATCGAAGGAGCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTAT 1685 Query 209 CCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG-AGGGACTAAAGGATCGAT 267 ||||||||||||||||||| ||||||| || ||||| | | | || | ||||||||||| Sbjct 1686 CCCTGTGGTAACTTTTCTGACACCTCTTGCTTCAAACTCAGAATGGCCAAAAGGATCGAT 1745 Query 268 AGGCCACACTTTCATGGTTTGTATTC 293 ||||| | ||||| ||| |||||| Sbjct 1746 AGGCCGCGCTTTCGCGGTCCGTATTC 1771 >seq3135 Length=34803 Score = 318 bits (352), Expect = 1e-84 Identities = 200/216 (93%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29 GGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCC 88 |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1082 GGTCGTCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCC 1141 Query 89 TATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCC 148 | | ||||||||||||||| |||||| ||||| |||||||| ||||||||||||||| Sbjct 1142 TGTAGGTGGGTGAACAATCCTACGCTTGGCGAATACTGCTTCGCAATGATAGGAAGAGCC 1201 Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 208 ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct 1202 GACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTAT 1261 Query 209 CCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA 244 ||||||||||||||||||| ||||||| || ||||| Sbjct 1262 CCCTGTGGTAACTTTTCTGACACCTCTTGCTTCAAA 1297 >seq1785 Length=7427 Score = 176 bits (194), Expect = 8e-42 Identities = 115/127 (91%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 6706 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 6647 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||| |||||||||||||||| | | ||||| |||||| ||||||||||||||||| Sbjct 6646 TTAACGGGTGAACAATCCAACACGTTGTGAATTATGCTTCACAATGATAGGAAGAGCCGA 6587 Query 151 CATCGAA 157 ||||||| Sbjct 6586 CATCGAA 6580 >seq2660 Length=3997 Score = 129 bits (142), Expect = 1e-27 Identities = 99/116 (85%), Gaps = 1/116 (1%) Strand=Plus/Plus Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 2676 ATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGC 2735 Query 239 CTCAAATTTCG-AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 ||||| | | | || | |||||||||||||||| | ||||| ||| |||||| Sbjct 2736 TTCAAACTCAGAATGGCCAAAAGGATCGATAGGCCGCGCTTTCGCGGTCCGTATTC 2791 >seq436 Length=167649 Score = 75.2 bits (82), Expect = 2e-11 Identities = 126/181 (70%), Gaps = 6/181 (3%) Strand=Plus/Minus Query 47 ACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT 106 || || |||||||| |||| | |||||||||||||||| || ||| || ||||| Sbjct 101916 ACCAAACTGTCTCACGACGTTTTAAACCCAGCTCACGTACCTCTTTAAATGGCGAACAGC 101857 Query 107 CCAACGCTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCA 163 | || ||| |||| | | || | | |||| || ||||||||||||| | || Sbjct 101856 CATACCCTTGGGACCGGCTACAGCCCCAGGATGA---GATGAGCCGACATCGAGGTGCCA 101800 Query 164 AAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTT 223 || | | ||||| ||||||| ||||| | | |||| |||||||| ||| |||| Sbjct 101799 AACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGCCTGTTATCCCCAGAGTACCTTT 101740 Query 224 T 224 | Sbjct 101739 T 101739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854355690816