Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20pulex_20[genbank_20GCA_5F000187875.1_202011-02-04] 5,186 sequences; 197,206,209 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq436 174 3e-41 >seq436 Length=167649 Score = 174 bits (192), Expect = 3e-41 Identities = 229/311 (74%), Gaps = 5/311 (2%) Strand=Plus/Plus Query 31 CGCCAGTATTCAAGGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGAT-TTCTAACC 89 ||| ||| ||| |||||| |||| |||| |||| || ||| || || |||||||| Sbjct 101450 CGCTAGTTCTCATGGAGCCAACGTTGAAATACCACCC-TGGTGTGTTTGAGGTTCTAACC 101508 Query 90 GGACGACGTATAACCGTTGACGGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGC 149 | | | || ||| ||||||||| | ||||||||||||||||||||| | Sbjct 101509 T-AGGTCCCTTATCCGGATCGGGGACAGTGCATGGTAGGCAGTTTGACTGGGGCGGTCTC 101567 Query 150 CTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGAT-GGAAACCATGCGC 208 ||||||||| |||||||||| | | ||| ||| || || | | | ||| | | || Sbjct 101568 CTCCCAAAGCGTAACGGAGGAGTTCGAAGGTACGCT-AGTTACGGTCGGACATCGTGACG 101626 Query 209 ACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAG 268 | ||||||| |||| ||| ||| || ||||||| || |||||| ||||| |||||| Sbjct 101627 ATAGTGCAATGGCATAAGCGTGCTTAACTGCGAGACTGACAAGTCGAGCAGATGCGAAAG 101686 Query 269 TCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTA 328 || | || |||||||| ||| ||| |||||| |||| |||||| ||||||||||| || Sbjct 101687 CAGGACATAGTGATCCGGTGGTTCTGTATGGAAGGGCCATCGCTCAACGGATAAAAGGTA 101746 Query 329 CCCTGGGGATA 339 | ||||||||| Sbjct 101747 CTCTGGGGATA 101757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982349052736