Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20pulex_20[genbank_20GCA_5F000187875.1_202011-02-04] 5,186 sequences; 197,206,209 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq67 102 1e-19 >seq67 Length=727487 Score = 102 bits (112), Expect = 1e-19 Identities = 112/145 (77%), Gaps = 3/145 (2%) Strand=Plus/Plus Query 98 AAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTT-CATGCGTTTTTTACCG 156 |||||||||||||| |||||| ||| || || | | |||| |||||| || ||||| Sbjct 613479 AAGGAAGGCTTCTT-GTGGAACTTCTACTGATCCGA-TAGCTTTCATGCGCTTCTTACCA 613536 Query 157 GCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCC 216 || ||||| || ||||| || ||||| ||||| |||||||| || || ||||| || Sbjct 613537 GCTTTTTGTTTTTCAAGGAGTTTGCGTTTACGAGAAACGTCACCACCATAACATTTAGCA 613596 Query 217 AGTACGTTCTTTCTGAGAGCCTTGA 241 ||||||||||| | || ||||||| Sbjct 613597 AGTACGTTCTTACGAAGGGCCTTGA 613621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838356520576