Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Daphnia_20pulex_20[genbank_20GCA_5F000187875.1_202011-02-04] 5,186 sequences; 197,206,209 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq436 307 4e-81 >seq436 Length=167649 Score = 307 bits (340), Expect = 4e-81 Identities = 411/566 (73%), Gaps = 24/566 (4%) Strand=Plus/Minus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 ||||||||| ||||||||||| |||| | ||| ||| || |||| | | ||| || Sbjct 101673 TCGACTTGTCAGTCTCGCAGTTAAGCACGCTTATGCCATTGCACTATCGTCACGATGTCC 101614 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||| || | ||||| | | |||||||||| ||||||||| | ||||||||| Sbjct 101613 GACCGTAACTAGCGTACCTTCGAACTCCTCCGTTACGCTTTGGGAGGAGA-CCGCCCCAG 101555 Query 121 TTAAACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATA-TCCA 179 | ||||| || |||| ||||||||||| | || ||| | || || |||||||| || | Sbjct 101554 TCAAACTGCCTACCATGCACTGTCCCCGATCCGGATAAGGGACCTAGGTTAGAACCTCAA 101495 Query 180 CTACGGTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGC-CGCATCATA 238 || ||| ||||||||||||| | ||||| | ||||||| | | | ||| | Sbjct 101494 ACACAC-CAGGGTGGTATTTCAACGTTGGCTCCATGAGAACTAGCGACCCTCACTTCAAA 101436 Query 239 GTCTCCCACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTC 298 | ||||||||||||||||||| | | | || ||||||| |||||| ||| ||||| Sbjct 101435 GCCTCCCACCTATCCTACACAGATCTGTTCAAAGTCCAATACAAAGCTACAGTAAAGGTT 101376 Query 299 CC-GGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCAC 357 | ||||||||| |||| | ||||| | | ||||| | || | | ||| ||| | Sbjct 101375 CATGGGGTCTTTCCGTCTTTCCGCGGGGAGATTGCATCATCACAAACATTTCAACTTCGC 101316 Query 358 CGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTAC 417 | | || || ||||||| || |||||||||||||||||||||||||||||||| Sbjct 101315 TGAGTCTCAGGAGGAGACAGTGTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTAC 101256 Query 418 CCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCT 477 ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| || Sbjct 101255 CCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGACT 101196 Query 478 TCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCAC 537 ||||| | | || ||| ||| ||| |||| |||||||||| Sbjct 101195 TCAATCAAGAG-CTTGCACCCCA----------TCA--------TTTAATCTTCCAGCAC 101155 Query 538 CGGGCAGGCGTCAGTCCGTATACCTC 563 ||||||||||||| || ||||| || Sbjct 101154 CGGGCAGGCGTCACACCCTATACGTC 101129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702311713536