Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dendroctonus_20ponderosae_20[refseq_20GCF_5F000355655.1_202013-04- 10] 8,188 sequences; 252,847,629 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq7628 129 2e-27 >seq7628 Length=406357 Score = 129 bits (142), Expect = 2e-27 Identities = 117/144 (81%), Gaps = 4/144 (3%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| || |||||| |||| |||| |||||| | | ||||| ||||||| Sbjct 380375 GAGTCGGGTTGCTTGAGAGTGCAGCCCTAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 380434 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 || | ||| ||||||||||||| ||||||| |||| ||||| |||||||||||||| Sbjct 380435 AT-GACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGCACTTTG-- 380491 Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182 ||||||||| | || ||||| || Sbjct 380492 AAGAGAGTTTAGGAGTACGTGTAA 380515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079824367400