Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20farinae_20[genbank_20GCA_5F002085665.1_202017-04- 11] 1,706 sequences; 91,935,067 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq1430 87.8 1e-15 seq1289 87.8 1e-15 seq1255 87.8 1e-15 seq954 87.8 1e-15 seq851 87.8 1e-15 seq839 87.8 1e-15 seq829 87.8 1e-15 seq803 87.8 1e-15 seq801 87.8 1e-15 seq789 87.8 1e-15 seq328 87.8 1e-15 >seq1430 Length=310067 Score = 87.8 bits (96), Expect = 1e-15 Identities = 74/86 (86%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| ||| || ||||||||| ||||||||||| |||||||||| Sbjct 123358 TCCGAA-GACCTCACTAAAACATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 123302 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||| |||||| Sbjct 123301 GGCAGGGACGTAAT-CAACACAAGCT 123277 >seq1289 Length=313075 Score = 87.8 bits (96), Expect = 1e-15 Identities = 74/86 (86%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| ||| || ||||||||| ||||||||||| |||||||||| Sbjct 295019 TCCGAA-GACCTCACTAAAACATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 294963 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||| |||||| Sbjct 294962 GGCAGGGACGTAAT-CAACACAAGCT 294938 >seq1255 Length=349262 Score = 87.8 bits (96), Expect = 1e-15 Identities = 74/86 (86%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| ||| || ||||||||| ||||||||||| |||||||||| Sbjct 324288 TCCGAA-GACCTCACTAAAACATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 324232 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||| |||||| Sbjct 324231 GGCAGGGACGTAAT-CAACACAAGCT 324207 >seq954 Length=66514 Score = 87.8 bits (96), Expect = 1e-15 Identities = 74/86 (86%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| ||| || ||||||||| ||||||||||| |||||||||| Sbjct 49663 TCCGAA-GACCTCACTAAAACATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 49607 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||| |||||| Sbjct 49606 GGCAGGGACGTAAT-CAACACAAGCT 49582 >seq851 Length=522413 Score = 87.8 bits (96), Expect = 1e-15 Identities = 74/86 (86%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| ||| || ||||||||| ||||||||||| |||||||||| Sbjct 511740 TCCGAA-GACCTCACTAAAACATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 511684 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||| |||||| Sbjct 511683 GGCAGGGACGTAAT-CAACACAAGCT 511659 >seq839 Length=72495 Score = 87.8 bits (96), Expect = 1e-15 Identities = 74/86 (86%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| ||| || ||||||||| ||||||||||| |||||||||| Sbjct 65039 TCCGAA-GACCTCACTAAAACATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 65095 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||| |||||| Sbjct 65096 GGCAGGGACGTAAT-CAACACAAGCT 65120 >seq829 Length=1740722 Score = 87.8 bits (96), Expect = 1e-15 Identities = 74/86 (86%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| ||| || ||||||||| ||||||||||| |||||||||| Sbjct 987107 TCCGAA-GACCTCACTAAAACATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 987051 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||| |||||| Sbjct 987050 GGCAGGGACGTAAT-CAACACAAGCT 987026 >seq803 Length=117798 Score = 87.8 bits (96), Expect = 1e-15 Identities = 74/86 (86%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| ||| || ||||||||| ||||||||||| |||||||||| Sbjct 107476 TCCGAA-GACCTCACTAAAACATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 107420 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||| |||||| Sbjct 107419 GGCAGGGACGTAAT-CAACACAAGCT 107395 >seq801 Length=119047 Score = 87.8 bits (96), Expect = 1e-15 Identities = 74/86 (86%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| ||| || ||||||||| ||||||||||| |||||||||| Sbjct 107502 TCCGAA-GACCTCACTAAAACATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 107446 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||| |||||| Sbjct 107445 GGCAGGGACGTAAT-CAACACAAGCT 107421 >seq789 Length=136861 Score = 87.8 bits (96), Expect = 1e-15 Identities = 74/86 (86%), Gaps = 4/86 (5%) Strand=Plus/Minus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| ||| || ||||||||| ||||||||||| |||||||||| Sbjct 90850 TCCGAA-GACCTCACTAAAACATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 90794 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||| |||||| Sbjct 90793 GGCAGGGACGTAAT-CAACACAAGCT 90769 >seq328 Length=1149099 Score = 87.8 bits (96), Expect = 1e-15 Identities = 74/86 (86%), Gaps = 4/86 (5%) Strand=Plus/Plus Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98 |||||| | |||||||| ||| || ||||||||| ||||||||||| |||||||||| Sbjct 906442 TCCGAA-GACCTCACTAAAACATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 906498 Query 99 GGCAGGGACGTAATACAACGCAAGCT 124 |||||||||||||| |||| |||||| Sbjct 906499 GGCAGGGACGTAAT-CAACACAAGCT 906523 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300795189080