Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20farinae_20[genbank_20GCA_5F002085665.1_202017-04- 11] 1,706 sequences; 91,935,067 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq1430 84.2 3e-14 seq1289 84.2 3e-14 seq1156 84.2 3e-14 seq851 84.2 3e-14 seq839 84.2 3e-14 seq829 84.2 3e-14 seq803 84.2 3e-14 seq801 84.2 3e-14 seq789 84.2 3e-14 seq328 84.2 3e-14 seq954 80.6 3e-13 >seq1430 Length=310067 Score = 84.2 bits (92), Expect = 3e-14 Identities = 81/102 (79%), Gaps = 4/102 (4%) Strand=Plus/Minus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGT- 70 ||||||| || || || | ||||||||| |||||||||||| | |||||| |||| Sbjct 122509 ACCAACAGAACAGA-ACCAAGGTCCTATTCCATTATTCCATGCAACAGTATTCAGGCGAT 122451 Query 71 --AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | ||||||||||| |||||||||||| |||| ||||| || Sbjct 122450 TGATGCCTGCTTTGAGCACTCTAATTTTTTCAAAGTAAACGT 122409 >seq1289 Length=313075 Score = 84.2 bits (92), Expect = 3e-14 Identities = 81/102 (79%), Gaps = 4/102 (4%) Strand=Plus/Minus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGT- 70 ||||||| || || || | ||||||||| |||||||||||| | |||||| |||| Sbjct 294170 ACCAACAGAACAGA-ACCAAGGTCCTATTCCATTATTCCATGCAACAGTATTCAGGCGAT 294112 Query 71 --AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | ||||||||||| |||||||||||| |||| ||||| || Sbjct 294111 TGATGCCTGCTTTGAGCACTCTAATTTTTTCAAAGTAAACGT 294070 >seq1156 Length=376316 Score = 84.2 bits (92), Expect = 3e-14 Identities = 81/102 (79%), Gaps = 4/102 (4%) Strand=Plus/Minus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGT- 70 ||||||| || || || | ||||||||| |||||||||||| | |||||| |||| Sbjct 22706 ACCAACAGAACAGA-ACCAAGGTCCTATTCCATTATTCCATGCAACAGTATTCAGGCGAT 22648 Query 71 --AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | ||||||||||| |||||||||||| |||| ||||| || Sbjct 22647 TGATGCCTGCTTTGAGCACTCTAATTTTTTCAAAGTAAACGT 22606 >seq851 Length=522413 Score = 84.2 bits (92), Expect = 3e-14 Identities = 81/102 (79%), Gaps = 4/102 (4%) Strand=Plus/Minus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGT- 70 ||||||| || || || | ||||||||| |||||||||||| | |||||| |||| Sbjct 510891 ACCAACAGAACAGA-ACCAAGGTCCTATTCCATTATTCCATGCAACAGTATTCAGGCGAT 510833 Query 71 --AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | ||||||||||| |||||||||||| |||| ||||| || Sbjct 510832 TGATGCCTGCTTTGAGCACTCTAATTTTTTCAAAGTAAACGT 510791 >seq839 Length=72495 Score = 84.2 bits (92), Expect = 3e-14 Identities = 81/102 (79%), Gaps = 4/102 (4%) Strand=Plus/Plus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGT- 70 ||||||| || || || | ||||||||| |||||||||||| | |||||| |||| Sbjct 65888 ACCAACAGAACAGA-ACCAAGGTCCTATTCCATTATTCCATGCAACAGTATTCAGGCGAT 65946 Query 71 --AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | ||||||||||| |||||||||||| |||| ||||| || Sbjct 65947 TGATGCCTGCTTTGAGCACTCTAATTTTTTCAAAGTAAACGT 65988 >seq829 Length=1740722 Score = 84.2 bits (92), Expect = 3e-14 Identities = 81/102 (79%), Gaps = 4/102 (4%) Strand=Plus/Minus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGT- 70 ||||||| || || || | ||||||||| |||||||||||| | |||||| |||| Sbjct 986258 ACCAACAGAACAGA-ACCAAGGTCCTATTCCATTATTCCATGCAACAGTATTCAGGCGAT 986200 Query 71 --AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | ||||||||||| |||||||||||| |||| ||||| || Sbjct 986199 TGATGCCTGCTTTGAGCACTCTAATTTTTTCAAAGTAAACGT 986158 >seq803 Length=117798 Score = 84.2 bits (92), Expect = 3e-14 Identities = 81/102 (79%), Gaps = 4/102 (4%) Strand=Plus/Minus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGT- 70 ||||||| || || || | ||||||||| |||||||||||| | |||||| |||| Sbjct 106627 ACCAACAGAACAGA-ACCAAGGTCCTATTCCATTATTCCATGCAACAGTATTCAGGCGCT 106569 Query 71 --AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | ||||||||||| |||||||||||| |||| ||||| || Sbjct 106568 TGATGCCTGCTTTGAGCACTCTAATTTTTTCAAAGTAAACGT 106527 >seq801 Length=119047 Score = 84.2 bits (92), Expect = 3e-14 Identities = 81/102 (79%), Gaps = 4/102 (4%) Strand=Plus/Minus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGT- 70 ||||||| || || || | ||||||||| |||||||||||| | |||||| |||| Sbjct 106653 ACCAACAGAACAGA-ACCAAGGTCCTATTCCATTATTCCATGCAACAGTATTCAGGCGAT 106595 Query 71 --AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | ||||||||||| |||||||||||| |||| ||||| || Sbjct 106594 TGATGCCTGCTTTGAGCACTCTAATTTTTTCAAAGTAAACGT 106553 >seq789 Length=136861 Score = 84.2 bits (92), Expect = 3e-14 Identities = 81/102 (79%), Gaps = 4/102 (4%) Strand=Plus/Minus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGT- 70 ||||||| || || || | ||||||||| |||||||||||| | |||||| |||| Sbjct 90001 ACCAACAGAACAGA-ACCAAGGTCCTATTCCATTATTCCATGCAACAGTATTCAGGCGAT 89943 Query 71 --AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | ||||||||||| |||||||||||| |||| ||||| || Sbjct 89942 TGATGCCTGCTTTGAGCACTCTAATTTTTTCAAAGTAAACGT 89901 >seq328 Length=1149099 Score = 84.2 bits (92), Expect = 3e-14 Identities = 81/102 (79%), Gaps = 4/102 (4%) Strand=Plus/Plus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGT- 70 ||||||| || || || | ||||||||| |||||||||||| | |||||| |||| Sbjct 907291 ACCAACAGAACAGA-ACCAAGGTCCTATTCCATTATTCCATGCAACAGTATTCAGGCGAT 907349 Query 71 --AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | ||||||||||| |||||||||||| |||| ||||| || Sbjct 907350 TGATGCCTGCTTTGAGCACTCTAATTTTTTCAAAGTAAACGT 907391 >seq954 Length=66514 Score = 80.6 bits (88), Expect = 3e-13 Identities = 80/102 (78%), Gaps = 4/102 (4%) Strand=Plus/Minus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGT- 70 ||||||| || || || | ||||||||| |||||||||||| | |||||| |||| Sbjct 48814 ACCAACAGAACAGA-ACCAAGGTCCTATTCCATTATTCCATGCAACAGTATTCAGGCGAT 48756 Query 71 --AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 | |||||| |||| |||||||||||| |||| ||||| || Sbjct 48755 TGATGCCTGCATTGAGCACTCTAATTTTTTCAAAGTAAACGT 48714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595190163204