Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20farinae_20[genbank_20GCA_5F002085665.1_202017-04- 11] 1,706 sequences; 91,935,067 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1430 178 2e-42 seq1289 178 2e-42 seq851 178 2e-42 seq839 178 2e-42 seq829 178 2e-42 seq803 178 2e-42 seq801 178 2e-42 seq789 178 2e-42 seq328 178 2e-42 seq954 174 3e-41 seq1255 170 4e-40 seq1156 127 4e-27 >seq1430 Length=310067 Score = 178 bits (196), Expect = 2e-42 Identities = 202/264 (77%), Gaps = 9/264 (3%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGC--TCAAGCCG-ATGGAAGTTTGAGGCAATAACAGGTCT 127 ||||||||||||||| | |||| | ||||| ||| || ||| ||||||||||||| Sbjct 123048 GCTTCTTAGAGGGACAAACGGCGTTTCAGCCGTATGAAAAA--GAG-CAATAACAGGTCT 123104 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG--TT 185 ||||||||||||||||| | ||||||||||||||||||||||| | | || || | | Sbjct 123105 GTGATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAAAAATCAGCGTGCATG 123164 Query 186 CATC-ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || |||| || ||| ||| || | || ||||| | ||||| | ||||| | Sbjct 123165 TGTCTACCTACTTCGAAAGAAGCGGGAAACCGAGTGAAACTTTTTCGTGATTGGGATTGG 123224 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 | |||| |||| ||| | | |||||||||| || ||||||| | ||||||||| | | Sbjct 123225 GGATTGTAATTGTTGTCCATGAACGAGGAATTCCCAGTAAGCACAAGTCATCAGCTTGTG 123284 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||||| Sbjct 123285 TTGATTACGTCCCTGCCCTTTGTA 123308 >seq1289 Length=313075 Score = 178 bits (196), Expect = 2e-42 Identities = 202/264 (77%), Gaps = 9/264 (3%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGC--TCAAGCCG-ATGGAAGTTTGAGGCAATAACAGGTCT 127 ||||||||||||||| | |||| | ||||| ||| || ||| ||||||||||||| Sbjct 294709 GCTTCTTAGAGGGACAAACGGCGTTTCAGCCGTATGAAAAA--GAG-CAATAACAGGTCT 294765 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG--TT 185 ||||||||||||||||| | ||||||||||||||||||||||| | | || || | | Sbjct 294766 GTGATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAAAAATCAGCGTGCATG 294825 Query 186 CATC-ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || |||| || ||| ||| || | || ||||| | ||||| | ||||| | Sbjct 294826 TGTCTACCTACTTCGAAAGAAGCGGGAAACCGAGTGAAACTTTTTCGTGATTGGGATTGG 294885 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 | |||| |||| ||| | | |||||||||| || ||||||| | ||||||||| | | Sbjct 294886 GGATTGTAATTGTTGTCCATGAACGAGGAATTCCCAGTAAGCACAAGTCATCAGCTTGTG 294945 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||||| Sbjct 294946 TTGATTACGTCCCTGCCCTTTGTA 294969 >seq851 Length=522413 Score = 178 bits (196), Expect = 2e-42 Identities = 202/264 (77%), Gaps = 9/264 (3%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGC--TCAAGCCG-ATGGAAGTTTGAGGCAATAACAGGTCT 127 ||||||||||||||| | |||| | ||||| ||| || ||| ||||||||||||| Sbjct 511430 GCTTCTTAGAGGGACAAACGGCGTTTCAGCCGTATGAAAAA--GAG-CAATAACAGGTCT 511486 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG--TT 185 ||||||||||||||||| | ||||||||||||||||||||||| | | || || | | Sbjct 511487 GTGATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAAAAATCAGCGTGCATG 511546 Query 186 CATC-ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || |||| || ||| ||| || | || ||||| | ||||| | ||||| | Sbjct 511547 TGTCTACCTACTTCGAAAGAAGCGGGAAACCGAGTGAAACTTTTTCGTGATTGGGATTGG 511606 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 | |||| |||| ||| | | |||||||||| || ||||||| | ||||||||| | | Sbjct 511607 GGATTGTAATTGTTGTCCATGAACGAGGAATTCCCAGTAAGCACAAGTCATCAGCTTGTG 511666 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||||| Sbjct 511667 TTGATTACGTCCCTGCCCTTTGTA 511690 >seq839 Length=72495 Score = 178 bits (196), Expect = 2e-42 Identities = 202/264 (77%), Gaps = 9/264 (3%) Strand=Plus/Minus Query 71 GCTTCTTAGAGGGACTATCGGC--TCAAGCCG-ATGGAAGTTTGAGGCAATAACAGGTCT 127 ||||||||||||||| | |||| | ||||| ||| || ||| ||||||||||||| Sbjct 65349 GCTTCTTAGAGGGACAAACGGCGTTTCAGCCGTATGAAAAA--GAG-CAATAACAGGTCT 65293 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG--TT 185 ||||||||||||||||| | ||||||||||||||||||||||| | | || || | | Sbjct 65292 GTGATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAAAAATCAGCGTGCATG 65233 Query 186 CATC-ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || |||| || ||| ||| || | || ||||| | ||||| | ||||| | Sbjct 65232 TGTCTACCTACTTCGAAAGAAGCGGGAAACCGAGTGAAACTTTTTCGTGATTGGGATTGG 65173 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 | |||| |||| ||| | | |||||||||| || ||||||| | ||||||||| | | Sbjct 65172 GGATTGTAATTGTTGTCCATGAACGAGGAATTCCCAGTAAGCACAAGTCATCAGCTTGTG 65113 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||||| Sbjct 65112 TTGATTACGTCCCTGCCCTTTGTA 65089 >seq829 Length=1740722 Score = 178 bits (196), Expect = 2e-42 Identities = 202/264 (77%), Gaps = 9/264 (3%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGC--TCAAGCCG-ATGGAAGTTTGAGGCAATAACAGGTCT 127 ||||||||||||||| | |||| | ||||| ||| || ||| ||||||||||||| Sbjct 986797 GCTTCTTAGAGGGACAAACGGCGTTTCAGCCGTATGAAAAA--GAG-CAATAACAGGTCT 986853 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG--TT 185 ||||||||||||||||| | ||||||||||||||||||||||| | | || || | | Sbjct 986854 GTGATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAAAAATCAGCGTGCATG 986913 Query 186 CATC-ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || |||| || ||| ||| || | || ||||| | ||||| | ||||| | Sbjct 986914 TGTCTACCTACTTCGAAAGAAGCGGGAAACCGAGTGAAACTTTTTCGTGATTGGGATTGG 986973 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 | |||| |||| ||| | | |||||||||| || ||||||| | ||||||||| | | Sbjct 986974 GGATTGTAATTGTTGTCCATGAACGAGGAATTCCCAGTAAGCACAAGTCATCAGCTTGTG 987033 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||||| Sbjct 987034 TTGATTACGTCCCTGCCCTTTGTA 987057 >seq803 Length=117798 Score = 178 bits (196), Expect = 2e-42 Identities = 202/264 (77%), Gaps = 9/264 (3%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGC--TCAAGCCG-ATGGAAGTTTGAGGCAATAACAGGTCT 127 ||||||||||||||| | |||| | ||||| ||| || ||| ||||||||||||| Sbjct 107166 GCTTCTTAGAGGGACAAACGGCGTTTCAGCCGTATGAAAAA--GAG-CAATAACAGGTCT 107222 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG--TT 185 ||||||||||||||||| | ||||||||||||||||||||||| | | || || | | Sbjct 107223 GTGATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAAAAATCAGCGTGCATG 107282 Query 186 CATC-ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || |||| || ||| ||| || | || ||||| | ||||| | ||||| | Sbjct 107283 TGTCTACCTACTTCGAAAGAAGCGGGAAACCGAGTGAAACTTTTTCGTGATTGGGATTGG 107342 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 | |||| |||| ||| | | |||||||||| || ||||||| | ||||||||| | | Sbjct 107343 GGATTGTAATTGTTGTCCATGAACGAGGAATTCCCAGTAAGCACAAGTCATCAGCTTGTG 107402 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||||| Sbjct 107403 TTGATTACGTCCCTGCCCTTTGTA 107426 >seq801 Length=119047 Score = 178 bits (196), Expect = 2e-42 Identities = 202/264 (77%), Gaps = 9/264 (3%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGC--TCAAGCCG-ATGGAAGTTTGAGGCAATAACAGGTCT 127 ||||||||||||||| | |||| | ||||| ||| || ||| ||||||||||||| Sbjct 107192 GCTTCTTAGAGGGACAAACGGCGTTTCAGCCGTATGAAAAA--GAG-CAATAACAGGTCT 107248 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG--TT 185 ||||||||||||||||| | ||||||||||||||||||||||| | | || || | | Sbjct 107249 GTGATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAAAAATCAGCGTGCATG 107308 Query 186 CATC-ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || |||| || ||| ||| || | || ||||| | ||||| | ||||| | Sbjct 107309 TGTCTACCTACTTCGAAAGAAGCGGGAAACCGAGTGAAACTTTTTCGTGATTGGGATTGG 107368 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 | |||| |||| ||| | | |||||||||| || ||||||| | ||||||||| | | Sbjct 107369 GGATTGTAATTGTTGTCCATGAACGAGGAATTCCCAGTAAGCACAAGTCATCAGCTTGTG 107428 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||||| Sbjct 107429 TTGATTACGTCCCTGCCCTTTGTA 107452 >seq789 Length=136861 Score = 178 bits (196), Expect = 2e-42 Identities = 202/264 (77%), Gaps = 9/264 (3%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGC--TCAAGCCG-ATGGAAGTTTGAGGCAATAACAGGTCT 127 ||||||||||||||| | |||| | ||||| ||| || ||| ||||||||||||| Sbjct 90540 GCTTCTTAGAGGGACAAACGGCGTTTCAGCCGTATGAAAAA--GAG-CAATAACAGGTCT 90596 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG--TT 185 ||||||||||||||||| | ||||||||||||||||||||||| | | || || | | Sbjct 90597 GTGATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAAAAATCAGCGTGCATG 90656 Query 186 CATC-ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || |||| || ||| ||| || | || ||||| | ||||| | ||||| | Sbjct 90657 TGTCTACCTACTTCGAAAGAAGCGGGAAACCGAGTGAAACTTTTTCGTGATTGGGATTGG 90716 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 | |||| |||| ||| | | |||||||||| || ||||||| | ||||||||| | | Sbjct 90717 GGATTGTAATTGTTGTCCATGAACGAGGAATTCCCAGTAAGCACAAGTCATCAGCTTGTG 90776 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||||| Sbjct 90777 TTGATTACGTCCCTGCCCTTTGTA 90800 >seq328 Length=1149099 Score = 178 bits (196), Expect = 2e-42 Identities = 202/264 (77%), Gaps = 9/264 (3%) Strand=Plus/Minus Query 71 GCTTCTTAGAGGGACTATCGGC--TCAAGCCG-ATGGAAGTTTGAGGCAATAACAGGTCT 127 ||||||||||||||| | |||| | ||||| ||| || ||| ||||||||||||| Sbjct 906752 GCTTCTTAGAGGGACAAACGGCGTTTCAGCCGTATGAAAAA--GAG-CAATAACAGGTCT 906696 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG--TT 185 ||||||||||||||||| | ||||||||||||||||||||||| | | || || | | Sbjct 906695 GTGATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAAAAATCAGCGTGCATG 906636 Query 186 CATC-ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || |||| || ||| ||| || | || ||||| | ||||| | ||||| | Sbjct 906635 TGTCTACCTACTTCGAAAGAAGCGGGAAACCGAGTGAAACTTTTTCGTGATTGGGATTGG 906576 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 | |||| |||| ||| | | |||||||||| || ||||||| | ||||||||| | | Sbjct 906575 GGATTGTAATTGTTGTCCATGAACGAGGAATTCCCAGTAAGCACAAGTCATCAGCTTGTG 906516 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||||| Sbjct 906515 TTGATTACGTCCCTGCCCTTTGTA 906492 >seq954 Length=66514 Score = 174 bits (192), Expect = 3e-41 Identities = 200/264 (76%), Gaps = 9/264 (3%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGC---TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCT 127 ||||||||||||||| | |||| ||| | ||| || ||| ||||||||||||| Sbjct 49353 GCTTCTTAGAGGGACAAACGGCGTTTCATCCGTATGAAAAA--GAG-CAATAACAGGTCT 49409 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG--TT 185 ||||||||||||||||| | ||||||||||||||||||||||| | | || || | | Sbjct 49410 GTGATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAAAAATCAGCGTGCATG 49469 Query 186 CATC-ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || |||| || ||| ||| || | || ||||| | ||||| | ||||| | Sbjct 49470 TGTCTACCTACTTCGAAAGAAGCGGGAAACCGAGTGAAACTTTTTCGTGATTGGGATTGG 49529 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 | |||| |||| ||| | | |||||||||| || ||||||| | ||||||||| | | Sbjct 49530 GGATTGTAATTGTTGTCCATGAACGAGGAATTCCCAGTAAGCACAAGTCATCAGCTTGTG 49589 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||||| Sbjct 49590 TTGATTACGTCCCTGCCCTTTGTA 49613 >seq1255 Length=349262 Score = 170 bits (188), Expect = 4e-40 Identities = 201/264 (76%), Gaps = 10/264 (4%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGC--TCAAGCCG-ATGGAAGTTTGAGGCAATAACAGGTCT 127 ||||||||||||||| | |||| | ||||| ||| || ||| ||||||||||||| Sbjct 323979 GCTTCTTAGAGGGACAAACGGCGTTTCAGCCGTATGAAAAA--GAG-CAATAACAGGTCT 324035 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG--TT 185 |||||||| |||||||| | ||||||||||||||||||||||| | | || || | | Sbjct 324036 GTGATGCC-TTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAAAAATCAGCGTGCATG 324094 Query 186 CATC-ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || |||| || ||| ||| || | || ||||| | ||||| | ||||| | Sbjct 324095 TGTCTACCTACTTCGAAAGAAGCGGGAAACCGAGTGAAACTTTTTCGTGATTGGGATTGG 324154 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCG 304 | |||| |||| ||| | | |||||||||| || ||||||| | ||||||||| | | Sbjct 324155 GGATTGTAATTGTTGTCCATGAACGAGGAATTCCCAGTAAGCACAAGTCATCAGCTTGTG 324214 Query 305 TTGATTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||||||| Sbjct 324215 TTGATTACGTCCCTGCCCTTTGTA 324238 >seq1156 Length=376316 Score = 127 bits (140), Expect = 4e-27 Identities = 171/230 (74%), Gaps = 11/230 (5%) Strand=Plus/Plus Query 71 GCTTCTTAGAGGGACTATCGGC--TCAAGCCG-ATGGAAGTTTGAGGCAATAACAGGTCT 127 ||||||||||||||| | |||| | ||||| ||| || ||| ||||||||||||| Sbjct 23243 GCTTCTTAGAGGGACAAACGGCGTTTCAGCCGTATGAAAA---GAG-CAATAACAGGTCT 23298 Query 128 GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG--TT 185 ||||||||||||||||| | ||||||||||||||||||||||| | | || || | | Sbjct 23299 GTGATGCCCTTAGATGTCCGGGGCCGCACGCGCGCTACACTGAAAAAATCAGCGTGCATG 23358 Query 186 CATC-ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGA 244 || |||| || ||| ||| || | || ||||| | ||||| | ||||| | Sbjct 23359 TGTCTACCTACTTCGAAAGAAGCGGGAAACCGAGTGAAACTTTTTCGTGATTGGGATTGG 23418 Query 245 GCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCA 294 | |||| |||| ||| | | |||||||||| || ||||||| | |||| Sbjct 23419 GGATTGTAATTGTTGTCCATGAACGAGGAATTCC-AGTAAGCACAAGTCA 23467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947183840768