Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20farinae_20[genbank_20GCA_5F002085665.1_202017-04- 11] 1,706 sequences; 91,935,067 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1430 95.1 2e-17 seq1289 95.1 2e-17 seq1255 95.1 2e-17 seq1156 95.1 2e-17 seq954 95.1 2e-17 seq839 95.1 2e-17 seq829 95.1 2e-17 seq803 95.1 2e-17 seq801 95.1 2e-17 seq789 95.1 2e-17 seq328 95.1 2e-17 seq851 89.7 8e-16 >seq1430 Length=310067 Score = 95.1 bits (104), Expect = 2e-17 Identities = 92/116 (79%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || ||| || | |||||| || | | |||| ||| Sbjct 127689 GTACGAGAGGAACCGCAGA-TTCGGAC-ATTTGGTTCATGTGCTTAATCGACCGATTAGT 127746 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 | | ||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct 127747 GGCACGAAGCTACCATCCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAT 127802 >seq1289 Length=313075 Score = 95.1 bits (104), Expect = 2e-17 Identities = 92/116 (79%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || ||| || | |||||| || | | |||| ||| Sbjct 299356 GTACGAGAGGAACCGCAGA-TTCGGAC-ATTTGGTTCATGTGCTTAATCGACCGATTAGT 299413 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 | | ||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct 299414 GGCACGAAGCTACCATCCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAT 299469 >seq1255 Length=349262 Score = 95.1 bits (104), Expect = 2e-17 Identities = 92/116 (79%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || ||| || | |||||| || | | |||| ||| Sbjct 328626 GTACGAGAGGAACCGCAGA-TTCGGAC-ATTTGGTTCATGTGCTTAATCGACCGATTAGT 328683 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 | | ||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct 328684 GGCACGAAGCTACCATCCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAT 328739 >seq1156 Length=376316 Score = 95.1 bits (104), Expect = 2e-17 Identities = 92/116 (79%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || ||| || | |||||| || | | |||| ||| Sbjct 27790 GTACGAGAGGAACCGCAGA-TTCGGAC-ATTTGGTTCATGTGCTTAATCGACCGATTAGT 27847 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 | | ||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct 27848 GGCACGAAGCTACCATCCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAT 27903 >seq954 Length=66514 Score = 95.1 bits (104), Expect = 2e-17 Identities = 92/116 (79%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || ||| || | |||||| || | | |||| ||| Sbjct 53986 GTACGAGAGGAACCGCAGA-TTCGGAC-ATTTGGTTCATGTGCTTAATCGACCGATTAGT 54043 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 | | ||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct 54044 GGCACGAAGCTACCATCCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAT 54099 >seq839 Length=72495 Score = 95.1 bits (104), Expect = 2e-17 Identities = 92/116 (79%), Gaps = 2/116 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || ||| || | |||||| || | | |||| ||| Sbjct 60701 GTACGAGAGGAACCGCAGA-TTCGGAC-ATTTGGTTCATGTGCTTAATCGACCGATTAGT 60644 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 | | ||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct 60643 GGCACGAAGCTACCATCCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAT 60588 >seq829 Length=1740722 Score = 95.1 bits (104), Expect = 2e-17 Identities = 92/116 (79%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || ||| || | |||||| || | | |||| ||| Sbjct 991445 GTACGAGAGGAACCGCAGA-TTCGGAC-ATTTGGTTCATGTGCTTAATCGACCGATTAGT 991502 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 | | ||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct 991503 GGCACGAAGCTACCATCCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAT 991558 >seq803 Length=117798 Score = 95.1 bits (104), Expect = 2e-17 Identities = 92/116 (79%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || ||| || | |||||| || | | |||| ||| Sbjct 111812 GTACGAGAGGAACCGCAGA-TTCGGAC-ATTTGGTTCATGTGCTTAATCGACCGATTAGT 111869 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 | | ||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct 111870 GGCACGAAGCTACCATCCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAT 111925 >seq801 Length=119047 Score = 95.1 bits (104), Expect = 2e-17 Identities = 92/116 (79%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || ||| || | |||||| || | | |||| ||| Sbjct 111837 GTACGAGAGGAACCGCAGA-TTCGGAC-ATTTGGTTCATGTGCTTAATCGACCGATTAGT 111894 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 | | ||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct 111895 GGCACGAAGCTACCATCCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAT 111950 >seq789 Length=136861 Score = 95.1 bits (104), Expect = 2e-17 Identities = 92/116 (79%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || ||| || | |||||| || | | |||| ||| Sbjct 95191 GTACGAGAGGAACCGCAGA-TTCGGAC-ATTTGGTTCATGTGCTTAATCGACCGATTAGT 95248 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 | | ||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct 95249 GGCACGAAGCTACCATCCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAT 95304 >seq328 Length=1149099 Score = 95.1 bits (104), Expect = 2e-17 Identities = 92/116 (79%), Gaps = 2/116 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || ||| || | |||||| || | | |||| ||| Sbjct 902105 GTACGAGAGGAACCGCAGA-TTCGGAC-ATTTGGTTCATGTGCTTAATCGACCGATTAGT 902048 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 | | ||||||||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct 902047 GGCACGAAGCTACCATCCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAT 901992 >seq851 Length=522413 Score = 89.7 bits (98), Expect = 8e-16 Identities = 91/116 (78%), Gaps = 2/116 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| || ||| || | |||||| || | | |||| ||| Sbjct 516077 GTACGAGAGGAACCGCAGA-TTCGGAC-ATTTGGTTCATGTGCTTAATCGACCGATTAGT 516134 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT 116 | | ||||| ||||||| | ||||||||| |||||||||||||||||||||||||| Sbjct 516135 GGCACGAAGTTACCATCCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCAT 516190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819186461184