Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq657 174 2e-41
seq471 174 2e-41
>seq657
Length=2482312
Score = 174 bits (192), Expect = 2e-41
Identities = 175/221 (79%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| ||||| | |||| ||||||| | ||||||| |||||| |
Sbjct 2110 GTACAAAGGGCAGGGACGTAATCAACACAAGCT-GATGACTTGTGCTTACTGGGAATT-C 2053
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119
|||||| | | ||| |||| |||| | ||||| ||||||| || ||||| | ||
Sbjct 2052 CTCGTTCATGGACAATAATTACAATCCCCAATCCCAATCACGAAAAAGTTTCACTCGGTT 1993
Query 120 ACCCGGACCTGTCGGCCAAGGT-GATAGA--CTCGTTGAATACATCAGTGTAGCGCGCGT 176
|||| ||| |||| |||| || | | | || ||| | ||||||||||||||||
Sbjct 1992 TCCCGCTCCTTTCGGAGTAGGTAGACACATGCACGCTGATTTTTTCAGTGTAGCGCGCGT 1933
Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217
||||||| | |||||||||||||||||||||||||||||||
Sbjct 1932 GCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 1892
>seq471
Length=29810
Score = 174 bits (192), Expect = 2e-41
Identities = 179/231 (77%), Gaps = 5/231 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||| | ||| | | || | |||||| || ||||||||||||| |
Sbjct 24101 GTACAAAGGGCAGGGACGCAATCAGCACAAGATA-ATGACTTGCACTTACTAGGAATT-C 24044
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||| | || ||| ||||||||||||| ||||| |||||||| | ||||| |||||
Sbjct 24043 CTCGTTAATGATCAATAATTGCAATGATCAATCCCAATCACGATAAGATTTCTTAGATTT 23984
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
|| || ||| || || || ||| || |||| |||||||| ||||| |
Sbjct 23983 CCTCATTCTTTCG---AATTTGGTATACTTTCTGCTCTTATCATTGTAGCGCACGTGCAG 23927
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231
||||| |||||||||||||||| |||||||||||| ||| ||||||| ||
Sbjct 23926 CCCAGGTCATCTAAGGGCATCACGGACCTGTTATTGGCTCGAACTTCCTTG 23876
Score = 104 bits (114), Expect = 4e-20
Identities = 87/104 (84%), Gaps = 2/104 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||| | ||| | | || | |||||| || ||||||||||||| |
Sbjct 28518 GTACAAAGGGCAGGGACGCAATCAGCACAAGATA-ATGACTTGCACTTACTAGGAATT-C 28461
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGAT 104
|||||| | || ||| ||||||||||||| ||||| ||||||||
Sbjct 28460 CTCGTTTATGATCAATAATTGCAATGATCAATCCCAATCACGAT 28417
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751990369230
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |