Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq657 174 2e-41 seq471 174 2e-41 >seq657 Length=2482312 Score = 174 bits (192), Expect = 2e-41 Identities = 175/221 (79%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||| | |||| ||||||| | ||||||| |||||| | Sbjct 2110 GTACAAAGGGCAGGGACGTAATCAACACAAGCT-GATGACTTGTGCTTACTGGGAATT-C 2053 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA-GATT 119 |||||| | | ||| |||| |||| | ||||| ||||||| || ||||| | || Sbjct 2052 CTCGTTCATGGACAATAATTACAATCCCCAATCCCAATCACGAAAAAGTTTCACTCGGTT 1993 Query 120 ACCCGGACCTGTCGGCCAAGGT-GATAGA--CTCGTTGAATACATCAGTGTAGCGCGCGT 176 |||| ||| |||| |||| || | | | || ||| | |||||||||||||||| Sbjct 1992 TCCCGCTCCTTTCGGAGTAGGTAGACACATGCACGCTGATTTTTTCAGTGTAGCGCGCGT 1933 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 ||||||| | ||||||||||||||||||||||||||||||| Sbjct 1932 GCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 1892 >seq471 Length=29810 Score = 174 bits (192), Expect = 2e-41 Identities = 179/231 (77%), Gaps = 5/231 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||| | ||| | | || | |||||| || ||||||||||||| | Sbjct 24101 GTACAAAGGGCAGGGACGCAATCAGCACAAGATA-ATGACTTGCACTTACTAGGAATT-C 24044 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| | || ||| ||||||||||||| ||||| |||||||| | ||||| ||||| Sbjct 24043 CTCGTTAATGATCAATAATTGCAATGATCAATCCCAATCACGATAAGATTTCTTAGATTT 23984 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 || || ||| || || || ||| || |||| |||||||| ||||| | Sbjct 23983 CCTCATTCTTTCG---AATTTGGTATACTTTCTGCTCTTATCATTGTAGCGCACGTGCAG 23927 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||| |||||||||||||||| |||||||||||| ||| ||||||| || Sbjct 23926 CCCAGGTCATCTAAGGGCATCACGGACCTGTTATTGGCTCGAACTTCCTTG 23876 Score = 104 bits (114), Expect = 4e-20 Identities = 87/104 (84%), Gaps = 2/104 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||| | ||| | | || | |||||| || ||||||||||||| | Sbjct 28518 GTACAAAGGGCAGGGACGCAATCAGCACAAGATA-ATGACTTGCACTTACTAGGAATT-C 28461 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGAT 104 |||||| | || ||| ||||||||||||| ||||| |||||||| Sbjct 28460 CTCGTTTATGATCAATAATTGCAATGATCAATCCCAATCACGAT 28417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751990369230