Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020 17-06-21] 1,322 sequences; 70,764,025 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq471 86.0 3e-15 seq658 71.6 8e-11 seq657 71.6 8e-11 >seq471 Length=29810 Score = 86.0 bits (94), Expect = 3e-15 Identities = 89/114 (78%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 4 CCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGAT 63 |||||| |||| |||||||| || || ||||| || | | | || | || || ||| Sbjct 23574 CCCAAAAACTTAGATTTCTCTTAGAGTTCCGAGGAAGATATA-TAATCTCTTCACC-GAT 23517 Query 64 CCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||||||||| |||| |||||||||||||||| ||||||||||| Sbjct 23516 ACTCAGTCGGCATAGTTTATGGTTGGGACTACGACGGTATCTAATCGTCTTCGA 23463 >seq658 Length=722326 Score = 71.6 bits (78), Expect = 8e-11 Identities = 88/118 (75%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATC-GCC 59 ||||| ||| |||||| |||| || ||| ||| ||||||| | |||| || | | Sbjct 206044 GAACCGAAAAACTTTGGTTTCCCGGAAGCCGCCAGCCGAGTCATACA-ATAAACTCTGGC 206102 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| || || ||||| ||||| ||||| |||| | ||||||||||||| |||||| Sbjct 206103 TGATTGCTGGTTGGCATCGTTTATGGTTAGAACTAGGGCGGTATCTGATCGCCTTCGA 206160 >seq657 Length=2482312 Score = 71.6 bits (78), Expect = 8e-11 Identities = 88/118 (75%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATC-GCC 59 ||||| ||| |||||| |||| || ||| ||| ||||||| | |||| || | | Sbjct 1488 GAACCGAAAAACTTTGGTTTCCCGGAAGCCGCCAGCCGAGTCATACA-ATAAACTCTGGC 1430 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| || || ||||| ||||| ||||| |||| | ||||||||||||| |||||| Sbjct 1429 TGATTGCTGGTTGGCATCGTTTATGGTTAGAACTAGGGCGGTATCTGATCGCCTTCGA 1372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278396549580