Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dermatophagoides_20pteronyssinus_20[genbank_20GCA_5F001901225.2_2020
17-06-21] 1,322 sequences; 70,764,025 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq471 86.0 3e-15
seq658 71.6 8e-11
seq657 71.6 8e-11
>seq471
Length=29810
Score = 86.0 bits (94), Expect = 3e-15
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 4 CCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGAT 63
|||||| |||| |||||||| || || ||||| || | | | || | || || |||
Sbjct 23574 CCCAAAAACTTAGATTTCTCTTAGAGTTCCGAGGAAGATATA-TAATCTCTTCACC-GAT 23517
Query 64 CCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
| ||||||||||||||| |||| |||||||||||||||| |||||||||||
Sbjct 23516 ACTCAGTCGGCATAGTTTATGGTTGGGACTACGACGGTATCTAATCGTCTTCGA 23463
>seq658
Length=722326
Score = 71.6 bits (78), Expect = 8e-11
Identities = 88/118 (75%), Gaps = 2/118 (2%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATC-GCC 59
||||| ||| |||||| |||| || ||| ||| ||||||| | |||| || | |
Sbjct 206044 GAACCGAAAAACTTTGGTTTCCCGGAAGCCGCCAGCCGAGTCATACA-ATAAACTCTGGC 206102
Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||| || || ||||| ||||| ||||| |||| | ||||||||||||| ||||||
Sbjct 206103 TGATTGCTGGTTGGCATCGTTTATGGTTAGAACTAGGGCGGTATCTGATCGCCTTCGA 206160
>seq657
Length=2482312
Score = 71.6 bits (78), Expect = 8e-11
Identities = 88/118 (75%), Gaps = 2/118 (2%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATC-GCC 59
||||| ||| |||||| |||| || ||| ||| ||||||| | |||| || | |
Sbjct 1488 GAACCGAAAAACTTTGGTTTCCCGGAAGCCGCCAGCCGAGTCATACA-ATAAACTCTGGC 1430
Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||| || || ||||| ||||| ||||| |||| | ||||||||||||| ||||||
Sbjct 1429 TGATTGCTGGTTGGCATCGTTTATGGTTAGAACTAGGGCGGTATCTGATCGCCTTCGA 1372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278396549580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |